PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63862.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 266aa    MW: 29589.9 Da    PI: 7.9056
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-182171255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +++g
  GAY63862.1 21 RYRGIRRRP-WGKFAAEIRDPTRNG--ARLWLGTFSTAEEAARAYDRAAFAFRG 71
                69*******.**********98887..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEASEGGGKN NEKGRSVSEV RYRGIRRRPW GKFAAEIRDP TRNGARLWLG TFSTAEEAAR  60
AYDRAAFAFR GRSAILNFPN ESQYRCESSS SSFPSSSSSP LICYDAGGDG STESREKEAE  120
VIEFEYFDNK LLEKLLEPND QDWQGSPVLS CVVGGVISIQ YLFFLVGFVF RGEGKLNSIQ  180
DSLSVILLGQ NTLLDSGFLG GDSSSDRVKR KPPGTSNWVR QNRTLFLGLG LEKNFLIQKG  240
KQNFKQQPAS NNDFDVTATC YHKNDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-26ERF family protein