PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63845.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 796aa MW: 88209.5 Da PI: 6.1677

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00068	580	617	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ + K s + Le++++++ Lq GAY63845.1 580 RQLIQDRIKELRELVPNgS------KCSIDSLLERTIKHMLFLQ 617 77899************55......7777778999999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MGASSTTFDL HGILKSLCFN TAWKYAVFWK LKHRTRMVLT WEDGYYDNCG QQDSLENKCS 60 SESLENFHGG RYSHDPLGLA VAKMSYHVYS LGEGIVGQVA VTGKHQWIFS DQLVTNSCSS 120 FEFSDGWQSQ FSAGIRTIAV VAVVPHGVVQ LGSLDEVTED MKVVTHIRDV FAALNDISVG 180 HVSSTIQSSV KNTLSLPDLP TKTIPNRWHN LDEVVNRGGP DVQFPMFPYV EKHNDGSYAF 240 SGMQPKIGDG VVNRNEGIRL SSPGGVGSAK ILHPKSNVIN LDYQNQMGIH FISDGMSRVE 300 SSGWKDLGVI SEQNGTPFSI NSVIDSINLC SVALQAEKFV ADRTYLASNP LEAVLGEQVK 360 LECTDSCQNG MLHIPEISDI KFEKDLEKLQ NQTELNHLDP SGTSLKFSAV SELHEALGPA 420 FLRKDIYNDR EPENTVDGET VGMPELTSSS HLMFDSGSEN LLDAVVASVC NSGSDVKSER 480 TFCRSMQSLL TTEKKPESSS QSKNTNNSVS YSISQSSLVE EDAKHFLNSS EVCGAVSSKG 540 FSSTCPSTCS EQLDRSSEPA KNNKKRARTG ENGRPRPRDR QLIQDRIKEL RELVPNGSKC 600 SIDSLLERTI KHMLFLQSIT KHADKLSKCA ESKVKVFPDS RLVSTAYCEE YTNLFSFFFC 660 FFFNGHSIIY RPIYIILLNL QMHQKGNGIH GSNYEQGSSW AVEMGSHLKV CSIVVENLNK 720 NGQMLVEMLC EECSHFLEIA EAIRSLGLTI LKGVTEAHGD KTWICFVVEG QDNRIMHRMD 780 VLWSLVQLLQ SKTTSS

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MGASSTTFDL HGILKSLCFN TAWKYAVFWK LKHRTRMVLT WEDGYYDNCG QQDSLENKCS  60
SESLENFHGG RYSHDPLGLA VAKMSYHVYS LGEGIVGQVA VTGKHQWIFS DQLVTNSCSS  120
FEFSDGWQSQ FSAGIRTIAV VAVVPHGVVQ LGSLDEVTED MKVVTHIRDV FAALNDISVG  180
HVSSTIQSSV KNTLSLPDLP TKTIPNRWHN LDEVVNRGGP DVQFPMFPYV EKHNDGSYAF  240
SGMQPKIGDG VVNRNEGIRL SSPGGVGSAK ILHPKSNVIN LDYQNQMGIH FISDGMSRVE  300
SSGWKDLGVI SEQNGTPFSI NSVIDSINLC SVALQAEKFV ADRTYLASNP LEAVLGEQVK  360
LECTDSCQNG MLHIPEISDI KFEKDLEKLQ NQTELNHLDP SGTSLKFSAV SELHEALGPA  420
FLRKDIYNDR EPENTVDGET VGMPELTSSS HLMFDSGSEN LLDAVVASVC NSGSDVKSER  480
TFCRSMQSLL TTEKKPESSS QSKNTNNSVS YSISQSSLVE EDAKHFLNSS EVCGAVSSKG  540
FSSTCPSTCS EQLDRSSEPA KNNKKRARTG ENGRPRPRDR QLIQDRIKEL RELVPNGSKC  600
SIDSLLERTI KHMLFLQSIT KHADKLSKCA ESKVKVFPDS RLVSTAYCEE YTNLFSFFFC  660
FFFNGHSIIY RPIYIILLNL QMHQKGNGIH GSNYEQGSSW AVEMGSHLKV CSIVVENLNK  720
NGQMLVEMLC EECSHFLEIA EAIRSLGLTI LKGVTEAHGD KTWICFVVEG QDNRIMHRMD  780
VLWSLVQLLQ SKTTSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-176	bHLH family protein