PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63828.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 502aa MW: 55736.7 Da PI: 6.4558

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.8e-13	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq GAY63828.1 357 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 403 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MAEKFWTKEE DKAMVESVLG TEACEFLIKS TANNVMAELF TPPGDLGVHQ RLCQVVEGSN 60 WNYAIYWHAS NLKSGGSALI WGDGHCRDPK DGAVGGGKSS GVNKVDEVER KEEVKKRVLQ 120 KLHACFGGLE NYASRFDGVS GVEMFYLTSM YFNFRCDSAY GPGHAYKSGR SIWTSGIVSC 180 SDHYESRSFL AMSAGFQTVV FVPAKSGVVE LGSVKLIPEE QNFVEMVNTV FEGSSSVQTK 240 VFPKIFGHEL SLGGTKSQSI SINFSPKVED ELNFASDTYE IQAIGSNQVY GNSSNRCRSE 300 DEAKLFPHLN QMIVGGFDAQ ARVSSLEQKD DSSPQGDDRK PRKRGRKPAN GREEPLNHVE 360 AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITYIT DLQMKIRVLE TEKDMSNNKQ 420 KQISVPEIDF QPRHEDAVVR VSCPLDDHPV SSVMKTFSEH QIVAQESNVS TTEDKVIHTF 480 SIQTQSGAAE QLKEKLLAAL SK

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MAEKFWTKEE DKAMVESVLG TEACEFLIKS TANNVMAELF TPPGDLGVHQ RLCQVVEGSN  60
WNYAIYWHAS NLKSGGSALI WGDGHCRDPK DGAVGGGKSS GVNKVDEVER KEEVKKRVLQ  120
KLHACFGGLE NYASRFDGVS GVEMFYLTSM YFNFRCDSAY GPGHAYKSGR SIWTSGIVSC  180
SDHYESRSFL AMSAGFQTVV FVPAKSGVVE LGSVKLIPEE QNFVEMVNTV FEGSSSVQTK  240
VFPKIFGHEL SLGGTKSQSI SINFSPKVED ELNFASDTYE IQAIGSNQVY GNSSNRCRSE  300
DEAKLFPHLN QMIVGGFDAQ ARVSSLEQKD DSSPQGDDRK PRKRGRKPAN GREEPLNHVE  360
AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITYIT DLQMKIRVLE TEKDMSNNKQ  420
KQISVPEIDF QPRHEDAVVR VSCPLDDHPV SSVMKTFSEH QIVAQESNVS TTEDKVIHTF  480
SIQTQSGAAE QLKEKLLAAL SK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	347	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-162	bHLH family protein