PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63197.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 255aa    MW: 29072.9 Da    PI: 5.5334
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.45.7e-2391323128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                 +G+rF+Pt+eel+++ L k+++g+ l+    i+e+++y    Pw++  + +++ +++ wy F++ +k+   +kr +r++ +g+W+   + ke++++  k
  GAY63197.1   9 VGVRFKPTEEELIKFCLLKRAKGQVLSP-CPIAECELYGKrSPWEIFeEGANNyDKSIWYCFTSLKKA--GKKRISRVAGKGTWHGESSAKEIVDSkkK 104
                 7***********************9887.56****9995549****6333333245578888887665..578*********************98545 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 + ++g kkt+ f      kg+k+dW m+e+rl
  GAY63197.1 105 NVVIGFKKTFKFR----IKGKKSDWNMDEFRL 132
                 5569********7....7899*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEARFHLGVG VRFKPTEEEL IKFCLLKRAK GQVLSPCPIA ECELYGKRSP WEIFEEGANN  60
YDKSIWYCFT SLKKAGKKRI SRVAGKGTWH GESSAKEIVD SKKKNVVIGF KKTFKFRIKG  120
KKSDWNMDEF RLADDEENNN YVLCKIKKKK PKAAEDEEVE EMASELATTN TINNFAAESH  180
QSCSQMFIPP SSISACDNID VGEQCYGMEN LPNQVEIINS NGLRPPISEA TQKVTNITDD  240
DDWYAMLEEY LQQEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.12e-15NAC family protein