PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY63047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 707aa MW: 81126.6 Da PI: 7.2521 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 638 | 687 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a+++++g GAY63047.1 638 HFRGVRQRP-WGKWAAEIRDPK----KaARIWLGTFDTAEAAALAYDEAALRFKG 687 58*******.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MVSWRVEKIM GLGQKRIGEF NCELELKENE LNSLSVSLNL KNKPSSAQEW INKCQAYQKE 60 LRLWKNLIEE CYDEVELREK KVGEAQRSIE EQEKQLAFKE SKISSMQTLI EENEGLLKDK 120 EKLYDEVKNS LMLCETKLEC EKKELELTQS SIKELSMEFH SEEEKLELLQ GKVRLHENEV 180 ESLEQKLDSM RKQQKKYFDD VELKKRELNE IRKYIEELNQ DPASKDKELR FVQQSIEECS 240 KEIPGKKEEL ISKGKTIAEC SKEVELKKNQ LNLIQDKSSL FQTRTIVYLK ELKEKETHFD 300 SLKKGLEDRL QDLELKEREF EKRVKEFELR EKELDSIRKA VEDRSKNLLL QVKIKDPENL 360 TSSGRYLQFL LNQHLQKHDS IFCKVFDTIK SASEPALLVL DAMSGFYPPY SREGDLEFDV 420 SIIRRSCILL LEQLSTVAPE INAQVRDEAM KVAGEWKKKM RVAVENSLEV LGFLHLLAAY 480 RLAPAFDSEE LESLLCIVAQ HRQTPKLRRT LGFADKVPGL QCSTTGEGRS APSMLVGTSA 540 PLNQSVSSPM NLPQCSRMDP NSSTSSPVSQ YSGAQPQLEN QYKRLRRESP STIAYTPQTP 600 ASDNLSRSSL ATQYGPGVAH IGGQTQFGLL AGNVSRMHFR GVRQRPWGKW AAEIRDPKKA 660 ARIWLGTFDT AEAAALAYDE AALRFKGRKA KLNFPERVQS NLTTHLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 3e-27 | ERF family protein |