PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63045.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ERF

Protein Properties

Length: 822aa MW: 93800.1 Da PI: 8.2122

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.9	3e-19	638	687	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a+++++g GAY63045.1 638 HFRGVRQRP-WGKWAAEIRDPK----KaARIWLGTFDTAEAAALAYDEAALRFKG 687 58*****.******94....45*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
MVSWRVEKIM GLGQKRIGEF NCELELKENE LNSLSVSLNL KNKPSSAQEW INKCQAYQKE 60 LRLWKNLIEE CYDEVELREK KVGEAQRSIE EQEKQLAFKE SKISSMQTLI EENEGLLKDK 120 EKLYDEVKNS LMLCETKLEC EKKELELTQS SIKELSMEFH SEEEKLELLQ GKVRLHENEV 180 ESLEQKLDSM RKQQKKYFDD VELKKRELNE IRKYIEELNQ DPASKDKELR FVQQSIEECS 240 KEIPGKKEEL ISKGKTIAEC SKEVELKKNQ LNLIQDKSSL FQTRTIVYLK ELKEKETHFD 300 SLKKGLEDRL QDLELKEREF EKRVKEFELR EKELDSIRKA VEDRSKNLLL QVKIKDPENL 360 TSSGRYLQFL LNQHLQKHDS IFCKVFDTIK SASEPALLVL DAMSGFYPPY SREGDLEFDV 420 SIIRRSCILL LEQLSTVAPE INAQVRDEAM KVAGEWKKKM RVAVENSLEV LGFLHLLAAY 480 RLAPAFDSEE LESLLCIVAQ HRQTPKLRRT LGFADKVPGL QCSTTGEGRS APSMLVGTSA 540 PLNQSVSSPM NLPQCSRMDP NSSTSSPVSQ YSGAQPQLEN QYKRLRRESP STIAYTPQTP 600 ASDNLSRSSL ATQYGPGVAH IGGQTQFGLL AGNVSRMHFR GVRQRPWGKW AAEIRDPKKA 660 ARIWLGTFDT AEAAALAYDE AALRFKGRKA KLNFPERQPN YGIPSGLYGK YRYLPVTFPT 720 TSSSSSLSSS SATKRRRGSE GNPKAPATVA GKEQQDLIFA QQPYQNLLTT LFFGWQPQAS 780 CSILLSFPNN LNMRLIFGVV ADLGWAPFSW TFKIVFKDLS YG

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

MVSWRVEKIM GLGQKRIGEF NCELELKENE LNSLSVSLNL KNKPSSAQEW INKCQAYQKE  60
LRLWKNLIEE CYDEVELREK KVGEAQRSIE EQEKQLAFKE SKISSMQTLI EENEGLLKDK  120
EKLYDEVKNS LMLCETKLEC EKKELELTQS SIKELSMEFH SEEEKLELLQ GKVRLHENEV  180
ESLEQKLDSM RKQQKKYFDD VELKKRELNE IRKYIEELNQ DPASKDKELR FVQQSIEECS  240
KEIPGKKEEL ISKGKTIAEC SKEVELKKNQ LNLIQDKSSL FQTRTIVYLK ELKEKETHFD  300
SLKKGLEDRL QDLELKEREF EKRVKEFELR EKELDSIRKA VEDRSKNLLL QVKIKDPENL  360
TSSGRYLQFL LNQHLQKHDS IFCKVFDTIK SASEPALLVL DAMSGFYPPY SREGDLEFDV  420
SIIRRSCILL LEQLSTVAPE INAQVRDEAM KVAGEWKKKM RVAVENSLEV LGFLHLLAAY  480
RLAPAFDSEE LESLLCIVAQ HRQTPKLRRT LGFADKVPGL QCSTTGEGRS APSMLVGTSA  540
PLNQSVSSPM NLPQCSRMDP NSSTSSPVSQ YSGAQPQLEN QYKRLRRESP STIAYTPQTP  600
ASDNLSRSSL ATQYGPGVAH IGGQTQFGLL AGNVSRMHFR GVRQRPWGKW AAEIRDPKKA  660
ARIWLGTFDT AEAAALAYDE AALRFKGRKA KLNFPERQPN YGIPSGLYGK YRYLPVTFPT  720
TSSSSSLSSS SATKRRRGSE GNPKAPATVA GKEQQDLIFA QQPYQNLLTT LFFGWQPQAS  780
CSILLSFPNN LNMRLIFGVV ADLGWAPFSW TFKIVFKDLS YG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61890.1	2e-25	ERF family protein