PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63044.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ERF

Protein Properties

Length: 803aa MW: 92276.9 Da PI: 6.2194

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.2	5.7e-20	735	783	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIrdp+ ++r++lg+f+tae Aa a+++a+++++g GAY63044.1 735 QYRGVRQRH-WGKWVAEIRDPT----KARVWLGTFDTAEAAALAYDEAALRFYG 783 7*****9.******94....4*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MDNCTVNISE ELRVAESKKE ALRRSFDIAR SQSNSVPVFT GQWDDLEEHL DLTKKSLEKQ 60 SNDVDVKIRL LDQRAKEIES KEIELVLVGK KIEDCNGELA CKKKELGLVQ KRIGECKREL 120 QLKENELNSL SGSLNLKKEE LCSVQGWINK CQANQRELQL LKNLIKECCD EIELREKKVG 180 EVQRSIEEHE KQLAFKESKI SSMRTLIEEY EEVLKDKERP YDEVKKSLIL CETKLESEKK 240 ELELTQSSIK ELWMKFHSEQ EKLELLQGRV RMHENEVESL EQELDSMRKQ QKKYFDDVEL 300 KKRELNEIGK YIEELNQDPA SKDKELKFVQ QSIKECSEEF QWKKEESIST EKTIAECSKE 360 VELKKNQFNL TQHESNLFQT RTIGYLKELK EKEKHFDSLK KGLEDRLQDL EIKEREFEKR 420 VKEFELREKE FGSIRKAVED CSKNLLLQAK TEDPEKLTSS GRYLQFLLNQ HLQKHDSIFC 480 KVFDTIKSAR DPALLVLHAI SGFYPPHSRE GDLEFDVSII RRSCILLLEQ LSTVAPEINA 540 QVRDEAMKVA GEWKKKMRVA VENSLEVLGF LHLLAAYRLA PAFDGEELES LLRIVAQHRQ 600 TPKLRQTLGF ADKEPGLQCS TTAEGRSAPS MLVGTSAPTN QPDSSLMNLP QYSGMDPSNS 660 TSSPVSQFSG AQPQLENQYK RLRVESLSTI DYTPHALASD NLNRSSLATQ HGPGVDRIGG 720 QTQFGLLAGN VGIKQYRGVR QRHWGKWVAE IRDPTKARVW LGTFDTAEAA ALAYDEAALR 780 FYGCNAKLNF PERVQANLTT HLH

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MDNCTVNISE ELRVAESKKE ALRRSFDIAR SQSNSVPVFT GQWDDLEEHL DLTKKSLEKQ  60
SNDVDVKIRL LDQRAKEIES KEIELVLVGK KIEDCNGELA CKKKELGLVQ KRIGECKREL  120
QLKENELNSL SGSLNLKKEE LCSVQGWINK CQANQRELQL LKNLIKECCD EIELREKKVG  180
EVQRSIEEHE KQLAFKESKI SSMRTLIEEY EEVLKDKERP YDEVKKSLIL CETKLESEKK  240
ELELTQSSIK ELWMKFHSEQ EKLELLQGRV RMHENEVESL EQELDSMRKQ QKKYFDDVEL  300
KKRELNEIGK YIEELNQDPA SKDKELKFVQ QSIKECSEEF QWKKEESIST EKTIAECSKE  360
VELKKNQFNL TQHESNLFQT RTIGYLKELK EKEKHFDSLK KGLEDRLQDL EIKEREFEKR  420
VKEFELREKE FGSIRKAVED CSKNLLLQAK TEDPEKLTSS GRYLQFLLNQ HLQKHDSIFC  480
KVFDTIKSAR DPALLVLHAI SGFYPPHSRE GDLEFDVSII RRSCILLLEQ LSTVAPEINA  540
QVRDEAMKVA GEWKKKMRVA VENSLEVLGF LHLLAAYRLA PAFDGEELES LLRIVAQHRQ  600
TPKLRQTLGF ADKEPGLQCS TTAEGRSAPS MLVGTSAPTN QPDSSLMNLP QYSGMDPSNS  660
TSSPVSQFSG AQPQLENQYK RLRVESLSTI DYTPHALASD NLNRSSLATQ HGPGVDRIGG  720
QTQFGLLAGN VGIKQYRGVR QRHWGKWVAE IRDPTKARVW LGTFDTAEAA ALAYDEAALR  780
FYGCNAKLNF PERVQANLTT HLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13330.1	1e-20	ERF family protein