PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63008.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 327aa MW: 35857.9 Da PI: 6.4204

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39	1.8e-12	40	65	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 kprlrWt +LH+rFv+av+qLGG++ GAY63008.1 40 KPRLRWTADLHDRFVDAVTQLGGPDS 65 79*********************985 PP
2	Myb_DNA-binding	28.5	3.5e-09	42	64	1	23
TSSS-HHHHHHHHHHHHHTTTT- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggt 23 r+rWT+++++++vdav+qlGg++ GAY63008.1 42 RLRWTADLHDRFVDAVTQLGGPD 64 89******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MYSAIHSLPL DGGHPDFQGG PLDGTNLPGD ACLVLTTDPK PRLRWTADLH DRFVDAVTQL 60 GGPDSEMIVG SQVYEKLYIC SLLMLQVPVF HGYEMGTFHQ KHKRGLNKKH NKYRLGKQAC 120 KETTENSKDV SCVAESQDTG SSTTSSTRMV AQDPNDGYQV TEALRVQMEV QRRLHEQLEV 180 QRRLQLRIEA QGKYLQSILE KACKALNDQA IVAAGLEAAR EELSELAIKV SNDCQGMVPL 240 ENIKMPSISE LAAALESKNA STIPVRIGDC SVESCLTSTS SPVSPMGLGS QAAAMKKRPR 300 PLFGNGESLP LEGNMRQEVE WVMPHIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	301	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-102	G2-like family protein