PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63007.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 381aa MW: 42144.3 Da PI: 7.7611

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.7	2.3e-12	40	64	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LH+rFv+av+qLGG++ GAY63007.1 40 KPRLRWTADLHDRFVDAVTQLGGPD 64 79*********************98 PP
2	Myb_DNA-binding	61.6	1.6e-19	42	168	1	48
TSSS-HHHHHHHHHHHHHTTTT........................................................................ CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........................................................................ 22 r+rWT+++++++vdav+qlGg+ GAY63007.1 42 RLRWTADLHDRFVDAVTQLGGPdsemivgsqvyeklyicsllmlqvpvfhgyemgtfhqkhkrglnkkhnisfeivmqrekkksfyrfcdglvt 135 89****************************************************************************************** PP ......-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 ......tWktIartmg.kgRtlkqcksrwqkyl 48 t+ktI+rtmg kg+tl+++ks++qky+ GAY63007.1 136 skvqeaTPKTIMRTMGvKGLTLYHLKSHLQKYR 168 ******************************7 PP
3	G2-like	52.2	1.4e-16	139	169	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++AtPkti+++m+vkgLtl+h+kSHLQkYRl GAY63007.1 139 QEATPKTIMRTMGVKGLTLYHLKSHLQKYRL 169 78****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MYSAIHSLPL DGGHPDFQGG PLDGTNLPGD ACLVLTTDPK PRLRWTADLH DRFVDAVTQL 60 GGPDSEMIVG SQVYEKLYIC SLLMLQVPVF HGYEMGTFHQ KHKRGLNKKH NISFEIVMQR 120 EKKKSFYRFC DGLVTSKVQE ATPKTIMRTM GVKGLTLYHL KSHLQKYRLG KQACKETTEN 180 SKDVSCVAES QDTGSSTTSS TRMVAQDPND GYQVTEALRV QMEVQRRLHE QLEVQRRLQL 240 RIEAQGKYLQ SILEKACKAL NDQAIVAAGL EAAREELSEL AIKVSNDCQG MVPLENIKMP 300 SISELAAALE SKNASTIPVR IGDCSVESCL TSTSSPVSPM GLGSQAAAMK KRPRPLFGNG 360 ESLPLEGNMR QEVEWVMPHI G

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MYSAIHSLPL DGGHPDFQGG PLDGTNLPGD ACLVLTTDPK PRLRWTADLH DRFVDAVTQL  60
GGPDSEMIVG SQVYEKLYIC SLLMLQVPVF HGYEMGTFHQ KHKRGLNKKH NISFEIVMQR  120
EKKKSFYRFC DGLVTSKVQE ATPKTIMRTM GVKGLTLYHL KSHLQKYRLG KQACKETTEN  180
SKDVSCVAES QDTGSSTTSS TRMVAQDPND GYQVTEALRV QMEVQRRLHE QLEVQRRLQL  240
RIEAQGKYLQ SILEKACKAL NDQAIVAAGL EAAREELSEL AIKVSNDCQG MVPLENIKMP  300
SISELAAALE SKNASTIPVR IGDCSVESCL TSTSSPVSPM GLGSQAAAMK KRPRPLFGNG  360
ESLPLEGNMR QEVEWVMPHI G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	351	355	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	2e-86	G2-like family protein