PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62990.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 1139aa MW: 128216 Da PI: 5.9562

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	187.9	9.8e-59	94	209	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e ++rwl++ ei++iL n++k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+v+vl+cyYah+e+n++fqrrcyw+ GAY62990.1 94 EaQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWM 192 449********************************************************************************************** PP CG-1 102 Leeelekivlvhylevk 118 Le++l +iv+vhylev+ GAY62990.1 193 LEQDLMHIVFVHYLEVQ 209 ************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1139 aa Download sequence
MRSFSFPNSL PAEALCVQKQ PLLSHFEFPP DVDFDLPRHQ KLTFKIRNAD FNSQEKRNKT 60 RKRKSLQSIG LILMADRGSY ALAPRLDMQQ LQMEAQHRWL RPAEICEILC NYQKFHIASE 120 PPSRPPSGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVREA HEKLKVGSVD VLHCYYAHGE 180 DNENFQRRCY WMLEQDLMHI VFVHYLEVQG NKSNVGVRES NEVTSNPGKH SSLTFSFPGN 240 RTKAPSGITD STSPTSTLTL SCEDADSGYD AEDSHQASSR AHLYYELPQM GNGPRMEKMD 300 SGLSYSYFLS PSSVRSSIPG DYVSHAGHIP NDNQDLMIEC QKALGLASWE EVLEHCSGEN 360 ENVPSHAKLE SNVQKENIFD GELLSREASE ENSGSSLPVQ FNWQIPLADN SSHFSKSTMD 420 LSRDLEPAYD LGDGLFEQRT HDACLLGAPE PFCAFLDQQN ELPVQNNLQM QQRDVESHSL 480 TKSNSESEIH GEGTINFSFS VKQKLLNGEG NLEKVDSFSR WMSKELEEVD NLHVQSSGIQ 540 WSTEECGNVV DDSSLSPSLS QDQLFSIIDF SPKWTYTDPE IEVVVTGMFL KSHQEVAKCK 600 WSCMFAEVEV PAEVLADGVL CCRIPPHAVG RVPFYITCSN RLACSEVREF DYIVGSVKDA 660 DISDIYGSST SESFLHLRLE RILSMRSSPQ NHLSEGLCEK QKLISKIIQL KEEEESYQMV 720 EANPEKNLSQ HVEKYQILQK IMKEKLYSWL LRKVCEDGKG PCILDDEGQG VLHLAASLGY 780 DWAIKPTVTA GVSINFRDLS GEKTVAVLLS LGAAPGLLTD PSPEFPLSRT PSDLASSNGH 840 KGISGFLAES SLTSLLLSLK MNDSADDGAL EDSIAKAVQT VSEKTATPAN DNDESDVLSL 900 KDSLTAICNA TQAADRIHQI FRMQSFQRKQ LTEFNNELGI SYEHALSLVA AKSLRPVQGD 960 GLAHSAAIQI QKKFRGWKKR KEFLLIRQRI VKIQAHVRGH QARKKYRPII WSVGILEKVI 1020 LRWRRKGSGL RGFRRDALGM NPNPQHVPLK EDDYDFLKDG RKQTEERLQK ALGRVKSMVQ 1080 YPEARAQYRR LLTVVEGSRE TKESNMVPNG LEDIADGDLD LIDIDSLLDD DTFMSVAFE

Sequence ? help Back to Top

Protein Sequence Length: 1139 aa Download sequence

MRSFSFPNSL PAEALCVQKQ PLLSHFEFPP DVDFDLPRHQ KLTFKIRNAD FNSQEKRNKT  60
RKRKSLQSIG LILMADRGSY ALAPRLDMQQ LQMEAQHRWL RPAEICEILC NYQKFHIASE  120
PPSRPPSGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVREA HEKLKVGSVD VLHCYYAHGE  180
DNENFQRRCY WMLEQDLMHI VFVHYLEVQG NKSNVGVRES NEVTSNPGKH SSLTFSFPGN  240
RTKAPSGITD STSPTSTLTL SCEDADSGYD AEDSHQASSR AHLYYELPQM GNGPRMEKMD  300
SGLSYSYFLS PSSVRSSIPG DYVSHAGHIP NDNQDLMIEC QKALGLASWE EVLEHCSGEN  360
ENVPSHAKLE SNVQKENIFD GELLSREASE ENSGSSLPVQ FNWQIPLADN SSHFSKSTMD  420
LSRDLEPAYD LGDGLFEQRT HDACLLGAPE PFCAFLDQQN ELPVQNNLQM QQRDVESHSL  480
TKSNSESEIH GEGTINFSFS VKQKLLNGEG NLEKVDSFSR WMSKELEEVD NLHVQSSGIQ  540
WSTEECGNVV DDSSLSPSLS QDQLFSIIDF SPKWTYTDPE IEVVVTGMFL KSHQEVAKCK  600
WSCMFAEVEV PAEVLADGVL CCRIPPHAVG RVPFYITCSN RLACSEVREF DYIVGSVKDA  660
DISDIYGSST SESFLHLRLE RILSMRSSPQ NHLSEGLCEK QKLISKIIQL KEEEESYQMV  720
EANPEKNLSQ HVEKYQILQK IMKEKLYSWL LRKVCEDGKG PCILDDEGQG VLHLAASLGY  780
DWAIKPTVTA GVSINFRDLS GEKTVAVLLS LGAAPGLLTD PSPEFPLSRT PSDLASSNGH  840
KGISGFLAES SLTSLLLSLK MNDSADDGAL EDSIAKAVQT VSEKTATPAN DNDESDVLSL  900
KDSLTAICNA TQAADRIHQI FRMQSFQRKQ LTEFNNELGI SYEHALSLVA AKSLRPVQGD  960
GLAHSAAIQI QKKFRGWKKR KEFLLIRQRI VKIQAHVRGH QARKKYRPII WSVGILEKVI  1020
LRWRRKGSGL RGFRRDALGM NPNPQHVPLK EDDYDFLKDG RKQTEERLQK ALGRVKSMVQ  1080
YPEARAQYRR LLTVVEGSRE TKESNMVPNG LEDIADGDLD LIDIDSLLDD DTFMSVAFE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	65	TRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein