PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62989.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 1146aa MW: 128966 Da PI: 5.9013

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	187.9	9.9e-59	94	209	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e ++rwl++ ei++iL n++k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+v+vl+cyYah+e+n++fqrrcyw+ GAY62989.1 94 EaQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWM 192 449********************************************************************************************** PP CG-1 102 Leeelekivlvhylevk 118 Le++l +iv+vhylev+ GAY62989.1 193 LEQDLMHIVFVHYLEVQ 209 ************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1146 aa Download sequence
MRSFSFPNSL PAEALCVQKQ PLLSHFEFPP DVDFDLPRHQ KLTFKIRNAD FNSQEKRNKT 60 RKRKSLQSIG LILMADRGSY ALAPRLDMQQ LQMEAQHRWL RPAEICEILC NYQKFHIASE 120 PPSRPPSGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVREA HEKLKVGSVD VLHCYYAHGE 180 DNENFQRRCY WMLEQDLMHI VFVHYLEVQG NKSNVGVRES NEVTSNPGKH SSLTFSFPGN 240 RTKAPSGITD STSPTSTLTL SCEDADSGYD AEDSHQASSR AHLYYELPQM GNGPRMEKMD 300 SGLSYSYFLS PSSGCPEVRS SIPGDYVSHA GHIPNDNQDL MIECQKALGL ASWEEVLEHC 360 SGENENVPSH AKLESNVQKE NIFDGELLSR EASEENSGSS LPVQFNWQIP LADNSSHFSK 420 STMDLSRDLE PAYDLGDGLF EQRTHDACLL GAPEPFCAFL DQQNELPVQN NLQMQQRDVE 480 SHSLTKSNSE SEIHGEGTIN FSFSVKQKLL NGEGNLEKVD SFSRWMSKEL EEVDNLHVQS 540 SGIQWSTEEC GNVVDDSSLS PSLSQDQLFS IIDFSPKWTY TDPEIEVVVT GMFLKSHQEV 600 AKCKWSCMFA EVEVPAEVLA DGVLCCRIPP HAVGRVPFYI TCSNRLACSE VREFDYIVGS 660 VKDADISDIY GSSTSESFLH LRLERILSMR SSPQNHLSEG LCEKQKLISK IIQLKEEEES 720 YQMVEANPEK NLSQHVEKYQ ILQKIMKEKL YSWLLRKVCE DGKGPCILDD EGQGVLHLAA 780 SLGYDWAIKP TVTAGVSINF RDLSGEKTVA VLLSLGAAPG LLTDPSPEFP LSRTPSDLAS 840 SNGHKGISGF LAESSLTSLL LSLKMNDSAD DGALEDSIAK AVQTVSEKTA TPANDNDESD 900 VLSLKDSLTA ICNATQAADR IHQIFRMQSF QRKQLTEFNN ELGISYEHAL SLVAAKSLRP 960 VQGDGLAHSA AIQIQKKFRG WKKRKEFLLI RQRIVKIQAH VRGHQARKKY RPIIWSVGIL 1020 EKVILRWRRK GSGLRGFRRD ALGMNPNPQH VPLKEDDYDF LKDGRKQTEE RLQKALGRVK 1080 SMVQYPEARA QYRRLLTVVE GSRETKESNM VPNGLEDIAD GDLDLIDIDS LLDDDTFIDI 1140 VTPVQY

Sequence ? help Back to Top

Protein Sequence Length: 1146 aa Download sequence

MRSFSFPNSL PAEALCVQKQ PLLSHFEFPP DVDFDLPRHQ KLTFKIRNAD FNSQEKRNKT  60
RKRKSLQSIG LILMADRGSY ALAPRLDMQQ LQMEAQHRWL RPAEICEILC NYQKFHIASE  120
PPSRPPSGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVREA HEKLKVGSVD VLHCYYAHGE  180
DNENFQRRCY WMLEQDLMHI VFVHYLEVQG NKSNVGVRES NEVTSNPGKH SSLTFSFPGN  240
RTKAPSGITD STSPTSTLTL SCEDADSGYD AEDSHQASSR AHLYYELPQM GNGPRMEKMD  300
SGLSYSYFLS PSSGCPEVRS SIPGDYVSHA GHIPNDNQDL MIECQKALGL ASWEEVLEHC  360
SGENENVPSH AKLESNVQKE NIFDGELLSR EASEENSGSS LPVQFNWQIP LADNSSHFSK  420
STMDLSRDLE PAYDLGDGLF EQRTHDACLL GAPEPFCAFL DQQNELPVQN NLQMQQRDVE  480
SHSLTKSNSE SEIHGEGTIN FSFSVKQKLL NGEGNLEKVD SFSRWMSKEL EEVDNLHVQS  540
SGIQWSTEEC GNVVDDSSLS PSLSQDQLFS IIDFSPKWTY TDPEIEVVVT GMFLKSHQEV  600
AKCKWSCMFA EVEVPAEVLA DGVLCCRIPP HAVGRVPFYI TCSNRLACSE VREFDYIVGS  660
VKDADISDIY GSSTSESFLH LRLERILSMR SSPQNHLSEG LCEKQKLISK IIQLKEEEES  720
YQMVEANPEK NLSQHVEKYQ ILQKIMKEKL YSWLLRKVCE DGKGPCILDD EGQGVLHLAA  780
SLGYDWAIKP TVTAGVSINF RDLSGEKTVA VLLSLGAAPG LLTDPSPEFP LSRTPSDLAS  840
SNGHKGISGF LAESSLTSLL LSLKMNDSAD DGALEDSIAK AVQTVSEKTA TPANDNDESD  900
VLSLKDSLTA ICNATQAADR IHQIFRMQSF QRKQLTEFNN ELGISYEHAL SLVAAKSLRP  960
VQGDGLAHSA AIQIQKKFRG WKKRKEFLLI RQRIVKIQAH VRGHQARKKY RPIIWSVGIL  1020
EKVILRWRRK GSGLRGFRRD ALGMNPNPQH VPLKEDDYDF LKDGRKQTEE RLQKALGRVK  1080
SMVQYPEARA QYRRLLTVVE GSRETKESNM VPNGLEDIAD GDLDLIDIDS LLDDDTFIDI  1140
VTPVQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	65	TRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein