PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62925.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 573aa MW: 63249.9 Da PI: 8.3045

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.5	8.8e-17	346	392	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq GAY62925.1 346 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 392 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MNPCIPDWNF EGDIPISNQM KPMGQDNELV ELLWQNGHVV LSSQAQTQRK PSLNHNEPRQ 60 VQKQTLRGSG SCGNSSNLIQ DDETVSWIHC PIEDSFEKDF YSQLFSELPP SGPMEVDKHT 120 RQLREEKMVK FDPPGAVTSS QHPNVNHSVV PELQRNAMPP PRFEVHDAAQ QNKNLGDLGK 180 VVNFSQSTAP PKGELGPCSG QFDRKRSGNL TQGEVRECSM MTVGSSHCGS NQVAYDLDMS 240 RASSSGVGTT GLSPGKLNDD VRKVISPSER GKTETIEPTV TSSSGGSGSS FNRTSKQSTG 300 DNSLKRKSRD AVDSECQSEA AGFESGAGNK TAQRSGSCRR SRAAEVHNLS ERRRRDRINE 360 KMRALQELIP HCNKTDKASM LDEAIEYLKS LQLQLQMSQV MWMGSGMAPL MFPGMQHYMS 420 RMGMGMGPPP LPSVTNPMHF SRVPLVDQSM SMAQAQNRAV MCQASVLNPV NYQNQMQNSN 480 FTDQYARYMG FHPMQANSQP MNMFRFGSPT MQNQIVSLPS SSCVPFSGGA ATDNSPLSGK 540 MEKEGGRDRR GRHAPPPATS KTGKIRFSCY EWW

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MNPCIPDWNF EGDIPISNQM KPMGQDNELV ELLWQNGHVV LSSQAQTQRK PSLNHNEPRQ  60
VQKQTLRGSG SCGNSSNLIQ DDETVSWIHC PIEDSFEKDF YSQLFSELPP SGPMEVDKHT  120
RQLREEKMVK FDPPGAVTSS QHPNVNHSVV PELQRNAMPP PRFEVHDAAQ QNKNLGDLGK  180
VVNFSQSTAP PKGELGPCSG QFDRKRSGNL TQGEVRECSM MTVGSSHCGS NQVAYDLDMS  240
RASSSGVGTT GLSPGKLNDD VRKVISPSER GKTETIEPTV TSSSGGSGSS FNRTSKQSTG  300
DNSLKRKSRD AVDSECQSEA AGFESGAGNK TAQRSGSCRR SRAAEVHNLS ERRRRDRINE  360
KMRALQELIP HCNKTDKASM LDEAIEYLKS LQLQLQMSQV MWMGSGMAPL MFPGMQHYMS  420
RMGMGMGPPP LPSVTNPMHF SRVPLVDQSM SMAQAQNRAV MCQASVLNPV NYQNQMQNSN  480
FTDQYARYMG FHPMQANSQP MNMFRFGSPT MQNQIVSLPS SSCVPFSGGA ATDNSPLSGK  540
MEKEGGRDRR GRHAPPPATS KTGKIRFSCY EWW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	351	356	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59060.1	2e-42	bHLH family protein