PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 139aa MW: 15486.5 Da PI: 10.0171 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.4 | 4.2e-09 | 94 | 135 | 9 | 54 |
AP2 9 dkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 ++ +g+W+Ae d k ++lg f a+eAa+a+ +a+k ++ GAY62651.1 94 RP-WGKWAAETID----RyKGICIWLGIFNIAKEAARAYAEAAKHIR 135 66.*******666....3345***********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MRFSNKVEVP KSNDHRISSG KSLTDESSFF SGIFGTSAHT TPLKHSQEPY CTDDQKLSTK 60 KHLVVLTLSS AKAEDSSYKA AHDEGTEKKT LRARPWGKWA AETIDRYKGI CIWLGIFNIA 120 KEAARAYAEA AKHIRSNKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 6e-10 | ERF family protein |