PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY62565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25810.2 Da PI: 6.2346 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6e-18 | 60 | 110 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +g+Wv+eIr p++ + r++lg+f tae+Aa+a++ a+++++g+ GAY62565.1 60 TYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGSFPTAEMAARAHDVAALAIKGH 110 69****998.**********843...6***********************99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MDTDDKNFSS YSPSSTPTSK RSSKSQQANK EFMSPTIDNE NESNKKICNN GANALNKYPT 60 YRGVRMRSWG KWVSEIRQPR KKSRIWLGSF PTAEMAARAH DVAALAIKGH SAHLNFPELA 120 DELPRPASAA PKDIQAAAAK AAAAAIFDSP RRIEANNDTQ STCHDENKNS ADHHDHSSSD 180 DRDSAWFDHL PDLSLEGDDG KNRFCDSSWW QQAEFGHMGF QFEEILCWDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44940.1 | 6e-40 | ERF family protein |