PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 162aa MW: 19070.6 Da PI: 6.6001 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.6 | 2.1e-31 | 5 | 131 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +G++F+P++e+++ + L +k + +++ + ik++ di+ +ePwdL + + ++e++ wyfF++ ky++++r++r tk+g Wk t kd ++++ ++ GAY62109.1 5 MGYKFQPSNEQIL-YLLVEKRLSPHFSH-HPIKDIvDICGLEPWDLAtEsTPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKA-RNG 100 7**********99.55666666666666.6799988**********843355668889*************************************.788 PP NAM 99 lvglkktLvfy.kgrapkgektdWvmheyrl 128 +g+kk L+fy +g pk t+W mhey++ GAY62109.1 101 PTGTKKFLTFYrHGLPPKEAITEWGMHEYHV 131 9**********55799999**********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MENLMGYKFQ PSNEQILYLL VEKRLSPHFS HHPIKDIVDI CGLEPWDLAT ESTPESEDQV 60 WYFFCEPCYK YRESHRAHRR TKAGHWKITS KDSQIKARNG PTGTKKFLTF YRHGLPPKEA 120 ITEWGMHEYH VKDDPGYEDL MNESVVVWRV AILAVANEYV EN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 7e-27 | NAC family protein |