PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61899.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 582aa MW: 62909.5 Da PI: 6.5149

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.3e-30	244	302	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+H h+ GAY61899.1 244 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDMSILITTYEGTHSHP 302 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MPCVVKEEKS AESINHEHIC SQEARKLGIG GQIYEVSGLK SSSPSRHEKL AADGKEEDEL 60 ESAKAEMGEV REENERLKKM LEQIEKDYKS LQLRFFDILQ KADPAKKSTN STQYCSHDGQ 120 IMESELVSLC LGRSSSPGEA KKEERTSNNA SKSSRKNGDD EELKASLNLA LDPKIQPSLE 180 LGVSNLSPEN SSEETKEEEA GEAWPPSKVL KTMRGNGDDE VSPHSNVKRA RVSVRARCDA 240 PTLNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCAEDMSI LITTYEGTHS 300 HPLPVSATAM ASTTSAAASM LLSGSSTSQP GLSSTAPTTT AATAPNGLNF NIYDTSRTKP 360 FYSSNSTSAL FPTITLDLTN PSSSFSHFNR FSSSFASNPR FPSTNLNFSC SSESTLLPTL 420 WGNGFQAYGP YNQTPNGSLL NLGKNSQEQF YQSFMDKNQN QQAAAASASQ QALTETLTKA 480 MTSDPNFRSV IAAAISTMVG GNATNNGDQE NFGQNLMQNN TPPNNSILSQ NGKACASGYF 540 NGLSTLNSQT GSSSLLQSSL PFPIFKSSPT PTNDNNNKDQ SS

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MPCVVKEEKS AESINHEHIC SQEARKLGIG GQIYEVSGLK SSSPSRHEKL AADGKEEDEL  60
ESAKAEMGEV REENERLKKM LEQIEKDYKS LQLRFFDILQ KADPAKKSTN STQYCSHDGQ  120
IMESELVSLC LGRSSSPGEA KKEERTSNNA SKSSRKNGDD EELKASLNLA LDPKIQPSLE  180
LGVSNLSPEN SSEETKEEEA GEAWPPSKVL KTMRGNGDDE VSPHSNVKRA RVSVRARCDA  240
PTLNDGCQWR KYGQKIAKGN PCPRAYYRCT VAPGCPVRKQ VQRCAEDMSI LITTYEGTHS  300
HPLPVSATAM ASTTSAAASM LLSGSSTSQP GLSSTAPTTT AATAPNGLNF NIYDTSRTKP  360
FYSSNSTSAL FPTITLDLTN PSSSFSHFNR FSSSFASNPR FPSTNLNFSC SSESTLLPTL  420
WGNGFQAYGP YNQTPNGSLL NLGKNSQEQF YQSFMDKNQN QQAAAASASQ QALTETLTKA  480
MTSDPNFRSV IAAAISTMVG GNATNNGDQE NFGQNLMQNN TPPNNSILSQ NGKACASGYF  540
NGLSTLNSQT GSSSLLQSSL PFPIFKSSPT PTNDNNNKDQ SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-100	WRKY family protein