PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61881.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 399aa MW: 45125.9 Da PI: 6.3033

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.4e-52	14	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 + pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLp + ++a+ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ ++ GAY61881.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRPLPI-ELIKQVDIYKYDPWDLPkELATAGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSdGT 111 579*************************.89***********445566889**********************************9566 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfy+gra kg ktdW+mhe+rl GAY61881.1 112 KCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 142 67*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDDKNEIDKI DDVMLPGFRF HPTDEELVGF YLKRKIQQRP LPIELIKQVD IYKYDPWDLP 60 KELATAGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSDG TKCIGLKKSL 120 VFYRGRAAKG MKTDWMMHEF RLPSLTYSAP QKKLLDKTIP PNDAWAICRI FKKTNSMAQR 180 ALSHSWISPF PETAASDILN QGARCTQFSS ENVSCTTEIG SVIQLCGNND LQQASTTSFS 240 AFDIPTYKPL YPPLYKPSLP PASTGDLRNN FMFLPPEFSG PNECTNDAPS MLPNTAIFEN 300 IIKGSENNIE VEGQQQQSRG FSISVPQDMQ GNITMEEDET AGSRKNPNDN NNWGTIRSVG 360 FPFSLPLNMP DAWKSNLPWD SPPCTSEMST TYSTNNCYT

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDDKNEIDKI DDVMLPGFRF HPTDEELVGF YLKRKIQQRP LPIELIKQVD IYKYDPWDLP  60
KELATAGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSDG TKCIGLKKSL  120
VFYRGRAAKG MKTDWMMHEF RLPSLTYSAP QKKLLDKTIP PNDAWAICRI FKKTNSMAQR  180
ALSHSWISPF PETAASDILN QGARCTQFSS ENVSCTTEIG SVIQLCGNND LQQASTTSFS  240
AFDIPTYKPL YPPLYKPSLP PASTGDLRNN FMFLPPEFSG PNECTNDAPS MLPNTAIFEN  300
IIKGSENNIE VEGQQQQSRG FSISVPQDMQ GNITMEEDET AGSRKNPNDN NNWGTIRSVG  360
FPFSLPLNMP DAWKSNLPWD SPPCTSEMST TYSTNNCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-103	NAC family protein