PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61800.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 215aa    MW: 24742.8 Da    PI: 7.8999
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.3e-111310853128
         NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvglkktLvfy.......................kgrapkgektdWvmheyr 127
                 ++e+ +yfF+ +       +r nr++ +gyWk+tg  d ++ s kg+ +g kktLv+y                       + +++++ +t+W+m+eyr
  GAY61800.1  13 KGERIMYFFTWHTYI---RNRLNRVAGNGYWKETGGnDIQIGS-KGNPIGYKKTLVYYqfqgnyskgdatksvfyqyqyqgNYSEKDAMRTSWIMQEYR 107
                 344566999998664...469***********99872566666.999***********77777666666655555555533247778889999999999 PP

         NAM 128 l 128
                 +
  GAY61800.1 108 I 108
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MNACARTAKF QRKGERIMYF FTWHTYIRNR LNRVAGNGYW KETGGNDIQI GSKGNPIGYK  60
KTLVYYQFQG NYSKGDATKS VFYQYQYQGN YSEKDAMRTS WIMQEYRIND QHVPPAPYTQ  120
REANLMKNNK WLLCKIYKQQ TEFENGDELD TNVCSINTDM DTGSTGFSIP NPSASSKRGE  180
IECNCCAALC LMCKQLRLGC AADEEEDAFA QMENL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.16e-14NAC family protein