PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61392.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 322aa MW: 36032.2 Da PI: 9.5387

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	151	198	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq GAY61392.1 151 QDHIIAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 198 5699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MSQSPVIVEK VLNRKTLLGM EDLSFMNQWH MMNSIDEFNL LPIAAAFGEN LQHSYTHPSF 60 NNNTGIDRPQ KQLKTSTWNS SETGFNPNNV SSINMNQMGI LKPKQETGAG YPSDSLPSQV 120 SFGNNQNYVF KASQGAKRIS PGAGNRLSNT QDHIIAERKR REKLSQRFIA LSAIVPGLKK 180 MDKASVLGDA IKYLKQLQER VKILEEQANK KTIESVVFVK KTQLSDEGDN PNGAFNEALP 240 EIEARFCDKS VLIRVHCEKR KGVFEKIVAE IEKLHLTVIN SSVMTFGSSV LDVTIIAQMD 300 VEFNMTVKDL VKNLHSAFQL FA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	162	ERKRRE
2	158	163	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-67	bHLH family protein