PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61330.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 397aa MW: 44204.4 Da PI: 5.6756

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.9	8.5e-32	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee..v.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksg 81 lp G++F+P+d el+ e+L++k+ + + +e i+ +i++++P++Lp +k++ ++++fF+++ ++yatg+rk+r+ ++ GAY61330.1 55 LPIGVKFDPSDVELL-EHLAAKCGVGNskphmfI--DEfiPtIEGDqGICYTHPENLP-GAKKDGSSVHFFHRTTNAYATGQRKRRKiqsehslnEEHV 149 699**********.999999876665566432..332222444446******.55677899***************8567766665589 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k+v++ +g ++g++k++v+y +++ k+ k++Wvmh+y+l GAY61330.1 150 RWHKTGKTKPVIE-NGIQKGCRKIMVLYksTKKGTKPDKSNWVMHQYHL 197 9********.99********4434666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
ICRSWLVNSR AIAKKVRNAA RSSAQLIKDY GANRECPNCH YFIDNSDVSP EWPGLPIGVK 60 FDPSDVELLE HLAAKCGVGN SKPHMFIDEF IPTIEGDQGI CYTHPENLPG AKKDGSSVHF 120 FHRTTNAYAT GQRKRRKIQS EHSLNEEHVR WHKTGKTKPV IENGIQKGCR KIMVLYKSTK 180 KGTKPDKSNW VMHQYHLGTD EDEKDDEYVV SKVFYQQTKQ PEKNVDSPII EVPDNLIPDS 240 SPRTPLTNPP NPPRPGKSMV CDDVADDNTL KSSAQEPLHV AEASHVPQPA VKLEDDQGYI 300 TCLAGESEPQ DIGDPGLDGI YDSLLLCKED ISSKVFSGVN NVSYADIFHN AHHMKGNDSA 360 PCGIADLENL EFDTPPDSHL ADLQFSDESI LGWLDRI

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

ICRSWLVNSR AIAKKVRNAA RSSAQLIKDY GANRECPNCH YFIDNSDVSP EWPGLPIGVK  60
FDPSDVELLE HLAAKCGVGN SKPHMFIDEF IPTIEGDQGI CYTHPENLPG AKKDGSSVHF  120
FHRTTNAYAT GQRKRRKIQS EHSLNEEHVR WHKTGKTKPV IENGIQKGCR KIMVLYKSTK  180
KGTKPDKSNW VMHQYHLGTD EDEKDDEYVV SKVFYQQTKQ PEKNVDSPII EVPDNLIPDS  240
SPRTPLTNPP NPPRPGKSMV CDDVADDNTL KSSAQEPLHV AEASHVPQPA VKLEDDQGYI  300
TCLAGESEPQ DIGDPGLDGI YDSLLLCKED ISSKVFSGVN NVSYADIFHN AHHMKGNDSA  360
PCGIADLENL EFDTPPDSHL ADLQFSDESI LGWLDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	2e-97	NAC family protein