PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61255.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YC
Protein Properties Length: 231aa    MW: 24957 Da    PI: 4.84
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC179.33.5e-56391431102
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie+a+dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv
  GAY61255.1  39 QLQMFWSYQrqeIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 137
                 89*****998899************************************************************************************** PP

       NF-YC  97 prdelk 102
                 prde+k
  GAY61255.1 138 PRDEIK 143
                 ***975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MENNQQGQSS SYPPQPPSAA AAATASAPFH HLIQQQQQQL QMFWSYQRQE IEQANDFKNH  60
QLPLARIKKI MKADEDVRMI SAEAPILFAK ACELFILELT IRSWLHAEEN KRRTLQKNDI  120
AAAITRTDIF DFLVDIVPRD EIKDEAAGLG GMVGATASGV PYYYPPMGQP TGTAGPGGMM  180
IGRPAVDPTG VYVQPPSQAW QSVWQTPAGT GDDGSYGSGG SGGPANLDGQ G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.11e-112NF-YC family protein