PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY61192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 27319.3 Da PI: 5.6701 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.2e-19 | 109 | 158 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r+++g+f+tae Aa a+++a+ +++g GAY61192.1 109 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEAAALAYDQAAFAMRG 158 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDSSFCFQYP YSQFSPEYSS SSYSHNTNNS LESFTYKTFN NFHNNHQYLP FNENDSQEML 60 LLEVLNQASA NSMHTISSTS NNNNIKDDHE VSSRAVNATE EGPLKEVSYR GVRRRPWGKY 120 AAEIRDSTRN GVRVWIGTFD TAEAAALAYD QAAFAMRGTT AVLNFPVEKV YESLLEMKYD 180 FEVGSSPVLT LKKRHSMKRK GESKKKIKEK EMRLENVVVF EDLGTEYLEE LLSISDSTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-52 | ERF family protein |