PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY61128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29405.8 Da PI: 9.7514 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.1 | 4e-11 | 108 | 157 | 2 | 50 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkk 50 p Gf F P+deel++ yLk+k+ +k+ + +++ik+++iy + P+dL ++ GAY61128.1 108 PLGFSFCPNDEELLTVYLKNKLLNKPlPPDADAIKSLNIYMYGPQDLSAT 157 78************************5334477**************743 PP | |||||||
2 | NAM | 29.3 | 2.4e-09 | 159 | 203 | 87 | 128 |
NAM 87 gkdkevlsk.kgelvglkktLvfykg..rapkgektdWvmheyrl 128 g++++++ + ++ g kktLvfy+g ++ +++kt+W+m+ey++ GAY61128.1 159 GSSEKIYGSkLKTPLGYKKTLVFYRGkpHQANPTKTSWIMEEYKI 203 556667765345569*********8844566778*********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MRTQELIKIA LTFLLTLGKA SSMNEIDEHE HGGRNRARKK NDEHGHGLTD DDDEKKITMM 60 RRRMNADMDQ QTMMRRRKMN LNTIPLGRNL NRGRPPIVGR DLNSNPNPLG FSFCPNDEEL 120 LTVYLKNKLL NKPLPPDADA IKSLNIYMYG PQDLSATPGS SEKIYGSKLK TPLGYKKTLV 180 FYRGKPHQAN PTKTSWIMEE YKIDLNIIQS ESDDPIWTGW VVCKVYNKEK DPRKIEADIE 240 AYSLLKSKAH PIFPSY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 78 | RRRMNADMDQQTMMRRRK |
2 | 74 | 79 | MRRRKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 3e-12 | NAC family protein |