PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61117.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 293aa    MW: 32639.5 Da    PI: 6.7248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.5e-202878155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  GAY61117.1 28 CQYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                68*****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MESYKKSPLK PWKKGPTRGK GGPLNASCQY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPD AYLNLPHLHT DNNNPSSNNK SHNKFKWVPS KNFISMFPSC  120
GLLNVNAQPS VHVIHQRLEE LKKNGVFNQT SSSSSSSGES KVEAPTTCIG DKTLLEAVSV  180
REKEVEISSG NMLGWREEKK QIDLNEFLQQ LGILKEESQA EVTEGTEGSS GAAESESSMK  240
DYGELAAFAD TSFNWDALIE MHGNGIAGHH QLGGFQLYDV QEEVTLPTSI WNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.12e-73ERF family protein