PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60495.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 357aa MW: 40950.5 Da PI: 7.8953

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.4e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeel+++yL+kkv+ +k+++ evi+evd++k+ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + + GAY60495.1 8 VPPGFRFHPTDEELLHYYLRKKVSFQKFDM-EVIREVDLNKMEPWELQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN-S 104 69**************************.99**********963433332556*********************************9.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 +++g++ktLvfy+grap+g+k+dW+mheyrle GAY60495.1 105 YKKIGMRKTLVFYRGRAPHGQKSDWIMHEYRLE 137 999**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MASSGGGVPP GFRFHPTDEE LLHYYLRKKV SFQKFDMEVI REVDLNKMEP WELQERCRIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSYKKIGM RKTLVFYRGR 120 APHGQKSDWI MHEYRLEDGD DAQSNEDGWV ICRVFKKKNL FKIGNEQSSN INSSSSGHHH 180 HQQFNNTSSN NHQSHTSAFM QRENQYLLRG QHPELALHYS TSQMLPTPQY CLFQPQALVP 240 NYSTIPSTAD SPAAMVKQLM SNTSRDCESG SENLRYHHQQ ACEPGLEVGT CEPTATHQMV 300 AATTGGRDGQ GLNDWTMLDR LVTEDSSKGV TFEDPNAQHQ INQLSLRGEM NFWGYEK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MASSGGGVPP GFRFHPTDEE LLHYYLRKKV SFQKFDMEVI REVDLNKMEP WELQERCRIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSYKKIGM RKTLVFYRGR  120
APHGQKSDWI MHEYRLEDGD DAQSNEDGWV ICRVFKKKNL FKIGNEQSSN INSSSSGHHH  180
HQQFNNTSSN NHQSHTSAFM QRENQYLLRG QHPELALHYS TSQMLPTPQY CLFQPQALVP  240
NYSTIPSTAD SPAAMVKQLM SNTSRDCESG SENLRYHHQQ ACEPGLEVGT CEPTATHQMV  300
AATTGGRDGQ GLNDWTMLDR LVTEDSSKGV TFEDPNAQHQ INQLSLRGEM NFWGYEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-142	NAC family protein