PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60418.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Dof
Protein Properties Length: 249aa    MW: 27664.5 Da    PI: 8.6563
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.66.6e-393494363
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                e+ l+cprC+st+tkfCyynnys sqPr+fCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  GAY60418.1 34 ERVLNCPRCNSTDTKFCYYNNYSFSQPRHFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSS 94
                67899****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDTAYHWPQG IGFVTPMEAG SNPTLERRPK PQRERVLNCP RCNSTDTKFC YYNNYSFSQP  60
RHFCKTCRRY WTAGGSLRNV PVGGGSRKNK RSSSSSGLSM NLTDLNTPCF PDQSAVSSDH  120
NPNSTIHHEY HRDLKLAYPP NYTESKISSS SSASSSEFNS FMGMPAAASN SNANATCQSG  180
NILLQEPKKT LDFSSSDGFE NNGARLWFPL QDIKPEISNT TTDRFELNRG QAQAESTGYW  240
TRLLGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64620.12e-29Dof family protein