PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY60413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | LBD | ||||||||
Protein Properties | Length: 113aa MW: 13291.2 Da PI: 6.2285 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 29.7 | 1.8e-09 | 35 | 64 | 61 | 90 |
DUF260 61 lvyeAearardPvyGavgvilklqqqleql 90 + yeA+ r+rdPvyG+vg + +lq+q ++l GAY60413.1 35 MDYEANSRIRDPVYGCVGAVCHLQKQQQNL 64 56************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MSYFLKLLES FRELQSWVNL ATGACRTKRD CKLIMDYEAN SRIRDPVYGC VGAVCHLQKQ 60 QQNLIALIFM EMAQSQEQVL HRHQQQQPQQ QFIDTSCFLD EYSLGSTWEP LWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 4e-09 | LBD family protein |