PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60341.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 374aa    MW: 41611.4 Da    PI: 4.4891
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-1962111255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  GAY60341.1  62 QYRGIRQRP-WGKWAAEIRDPTK---GVRVWLGTFNTAEEAARAYDAEARRIRG 111
                 69*******.**********964...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MEINLISQMG CPDLHRLFTS LLAQSNQASI DMIYYIGWIR GSTALKHVEQ AKKSTERKRK  60
NQYRGIRQRP WGKWAAEIRD PTKGVRVWLG TFNTAEEAAR AYDAEARRIR GKKAKVNFPD  120
ETPAAAPKSS VKANSQKSVP KACLSPVQPS LNQNFNYLNN SDQDYYNNVS ILEEKPQVNQ  180
YGYMGSFPDD GELGFKPFVP TADDTPLYFN SDQGSNSFDC SDFGWGEQAS KTPEISSVLE  240
ATPEVDESQF VDAVANPMKK LKSNSENAVP VQDNNGKSLS DELLAFDNQV KFLPMPYPEG  300
SWEASLDAFL NGDNTQDGGN LMNLWSFDDF PSTLGGVFED WLSICVGDAV LNCWTCLSQA  360
MCGDCSQELS MFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.15e-60ERF family protein