PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY60268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24605 Da PI: 8.4701 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.2 | 8.4e-18 | 126 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp k r++lg+f++ +Aaka++ a+ +++g GAY60268.1 126 HYRGVRRRP-WGKYAAEIRDP---ArKGSRVWLGTFDSDVDAAKAYDSAAFRMRG 176 8********.**********8...4445**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MSHKNPSPCP VLLLYKLTQL TRSLHFSSIL INMSNMTTLE EESSILEFIR QFLLGDFTSL 60 DDPNLSFLQP MESEFPVIKS EPDSPTFCEI IKPEPLDITC LGSSNWTESP QKRSEPKLAD 120 TEERKHYRGV RRRPWGKYAA EIRDPARKGS RVWLGTFDSD VDAAKAYDSA AFRMRGRKAI 180 LNFPLEAGAD SPPAKNSRKR RREKTLDLQE STISII |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 198 | 202 | RKRRR |
2 | 198 | 204 | RKRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 6e-44 | ERF family protein |