PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59718.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 147aa MW: 16669.2 Da PI: 7.4256

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	154	1.3e-47	6	145	2	144
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 ++f+ +eq+CyvqC+fC+til+vsvP +s+++vvtvrCGhCtsllsvn++kas +lla+ sh +e +ee ++ee + +++ k+ s+s + GAY59718.1 6 HLFDLPEQICYVQCGFCTTILLVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASfvplHLLASFSH-----DDEPKEEFRKEEVQADQKAFKRFSPSILT 99 7899********************************************999777788888888.....44455666666666666666677777777 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasn 144 ss + +e++ + + v +PPekrqr+Psaynrfikeei+ + +n GAY59718.1 100 SSDNEEEDTGSVINH--VVSKPPEKRQRAPSAYNRFIKEEIRMLNKNN 145 776644444444444..588********************998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
MSALNHLFDL PEQICYVQCG FCTTILLVSV PCSSMSMVVT VRCGHCTSLL SVNMMKASFV 60 PLHLLASFSH DDEPKEEFRK EEVQADQKAF KRFSPSILTS SDNEEEDTGS VINHVVSKPP 120 EKRQRAPSAY NRFIKEEIRM LNKNNKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	7e-46	YABBY family protein