PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY59618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 476aa MW: 52542.5 Da PI: 8.7727 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.5 | 0.00027 | 260 | 277 | 2 | 19 |
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR++iN++ GAY59618.1 260 RSKHSATEQRRRSKINDR 277 889*************96 PP | |||||||
2 | HLH | 24.7 | 4.2e-08 | 300 | 332 | 19 | 55 |
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq GAY59618.1 300 QFQMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 332 5999*******9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence |
MELPQSRPFG TEGRRPTHDF LSLYSHSTVQ QDPRPPSQGG FLKTHDFLQV GKINAKEEST 60 LEITSIVEKP PPPAPPPPSS SSVEHNLPGG IGTYSISHVS YFGQKVPKPE GSLFAVAQTS 120 STEKNDENSN CSSYTGSGFT LWEESAVKKG KAGKENAGER AIGRGEATVN VGQWVSQSSS 180 TNNSHRNSFS SLSCSQPPGM KSQSFMEMIK SAKGSTHDDD LDDADEFILK RENSTTTNHK 240 GDLRVKVEGK SNDQKPNTPR SKHSATEQRR RSKINDRQVF YVYVSKTLTV SYDIEMYITQ 300 FQMLRELIPH SDQKRDKASF LLEVIEYIQF LQEKVHKYEG PFVGWNPERA KLAPWKNNHK 360 HAESYVDQSQ GINNGSATAL VFAAKFNEKN ASISPAIPGS AQKPVESDMT SASTFKTMDP 420 QPGITNKAMP FPMSLQPNCY KPVRNGGAAP SLRPRLASDA ENTTSQPQTL ECHTRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.2 | 3e-99 | bHLH family protein |