PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59540.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 1168aa MW: 130507 Da PI: 6.1053

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.8	3.2e-56	96	212	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 ++ ++rwl++ ei++iL n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqrr+yw GAY59540.1 96 IEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYW 194 5679********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Leeel++ivlvhy+evk GAY59540.1 195 MLEEELSHIVLVHYREVK 212 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1168 aa Download sequence
MVKYYYCSAC VSAKWTWKVK SKKLQSSRVD TSVKNRPLSE NSISAIPNSL EIVTFVCNFT 60 LGLASEINLI TDELTDDALV SFTTSSFIKD IEQILIEAQH RWLRPAEICE ILRNYTKFRI 120 APESPHTPPS GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKAG SVDVLHCYYA 180 HGEENENFQR RSYWMLEEEL SHIVLVHYRE VKGNRTNFNR AKVAEGATPY SQENEETIPN 240 SEVEGSQSSG FHPNSYQMPS QTADTSLNSA QASEYEDAES VYNNQASSRF HSFRDLQQPV 300 VEKIDAGLAD PYYPSSLTNN YQGKFSVVPG ADFISPAQTD KSRNSNDTGL TYEPRKNLDF 360 PSWEDVLQNC SQGVGSQPEA LGDIPNQGYD ILGEPFTNSF GERKEFGSHL QTRGEWQASR 420 NDSSHLSNWP MDQKVYLDSA HDLTSQSCEQ GAAHDGLLDS LRPPHAHPNM ENDVHEQLPN 480 AEHGHLLKSD PESSLTIDGK SFYSSAIKQH LIDGSTEGLK KLDSFNRWMS KELGDVKESN 540 MQSSSGAYWE TVESENGVDD SGVSPQARLD TYMMSPSLSQ DQLYSIIDFS PNWAYVGSEV 600 KVLITGRFLM SQQEAENCKW SCMFGEIEVP AEIVAGGVLR CHTSSQKVGR VPFYVTCSNR 660 LSCSEVREFE YRASHIPDVD VADNCGDITS ENLRMQFGKL LCLTSVSTPN YDPSNLSDIS 720 QLNSKISSLL KDENDDWDLM LKLTAEEKFS SEEVKEKLVQ KLLKEKLQVW LVQKAAEGGK 780 GPCVLDHCGQ GVLHFAAALG YDWALEPTTV AGVNINFRDV NGWTALHWAA YCGRERTVAS 840 LIALGAAPGA LSDPTPKYPS GRTPADLASS IGHKGIAGYL AESDLSSALS AISLNKKDGD 900 VAEVTGATAV QTVPQRCPTP VSDGDLPYGL SMKDSLAAVR NATQAAARIH QVFRVQSFQK 960 KQLKEYGNDT FGISDERALS LVAVKTQKPG HHDEPVHAAA TRIQNKFRSW KGRKDFLIIR 1020 KQIIKIQAHV RGHQVRKNYK KIIWSVGIME KIILRWRRRG SGLRGFKSET LTASSSMVAT 1080 SAKEDDYDFL KEGRKQKEER LQKALARVKS MVQYPEARDQ YRRLLNVVNE IQETKAMALS 1140 NAEETADFDD DLVDIEALLD DTLMPNAS

Sequence ? help Back to Top

Protein Sequence Length: 1168 aa Download sequence

MVKYYYCSAC VSAKWTWKVK SKKLQSSRVD TSVKNRPLSE NSISAIPNSL EIVTFVCNFT  60
LGLASEINLI TDELTDDALV SFTTSSFIKD IEQILIEAQH RWLRPAEICE ILRNYTKFRI  120
APESPHTPPS GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKAG SVDVLHCYYA  180
HGEENENFQR RSYWMLEEEL SHIVLVHYRE VKGNRTNFNR AKVAEGATPY SQENEETIPN  240
SEVEGSQSSG FHPNSYQMPS QTADTSLNSA QASEYEDAES VYNNQASSRF HSFRDLQQPV  300
VEKIDAGLAD PYYPSSLTNN YQGKFSVVPG ADFISPAQTD KSRNSNDTGL TYEPRKNLDF  360
PSWEDVLQNC SQGVGSQPEA LGDIPNQGYD ILGEPFTNSF GERKEFGSHL QTRGEWQASR  420
NDSSHLSNWP MDQKVYLDSA HDLTSQSCEQ GAAHDGLLDS LRPPHAHPNM ENDVHEQLPN  480
AEHGHLLKSD PESSLTIDGK SFYSSAIKQH LIDGSTEGLK KLDSFNRWMS KELGDVKESN  540
MQSSSGAYWE TVESENGVDD SGVSPQARLD TYMMSPSLSQ DQLYSIIDFS PNWAYVGSEV  600
KVLITGRFLM SQQEAENCKW SCMFGEIEVP AEIVAGGVLR CHTSSQKVGR VPFYVTCSNR  660
LSCSEVREFE YRASHIPDVD VADNCGDITS ENLRMQFGKL LCLTSVSTPN YDPSNLSDIS  720
QLNSKISSLL KDENDDWDLM LKLTAEEKFS SEEVKEKLVQ KLLKEKLQVW LVQKAAEGGK  780
GPCVLDHCGQ GVLHFAAALG YDWALEPTTV AGVNINFRDV NGWTALHWAA YCGRERTVAS  840
LIALGAAPGA LSDPTPKYPS GRTPADLASS IGHKGIAGYL AESDLSSALS AISLNKKDGD  900
VAEVTGATAV QTVPQRCPTP VSDGDLPYGL SMKDSLAAVR NATQAAARIH QVFRVQSFQK  960
KQLKEYGNDT FGISDERALS LVAVKTQKPG HHDEPVHAAA TRIQNKFRSW KGRKDFLIIR  1020
KQIIKIQAHV RGHQVRKNYK KIIWSVGIME KIILRWRRRG SGLRGFKSET LTASSSMVAT  1080
SAKEDDYDFL KEGRKQKEER LQKALARVKS MVQYPEARDQ YRRLLNVVNE IQETKAMALS  1140
NAEETADFDD DLVDIEALLD DTLMPNAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein