PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59473.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 306aa    MW: 34032 Da    PI: 8.8263
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.11.5e-31259854128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  GAY59473.1  25 GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 98 
                 689**********************************9999.999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MKISSTDFFE IWDCCGVVAG KAIFGEKEWY FFSPRDRKYP NGSRPNRVAG SGYWKATGTD  60
KIITTEGRKV GIKKALVFYV GKAPKGTKTN WIMHEYRLFE PSRKNGSSKL DDWVLCRIYK  120
KHSGSQKPVS ATSVSSSKEH SNGSCSSSSS HLDDVLESLP EIDDRFFALP RMNSLKTLQQ  180
EDNKVNNLQH LGSGNFDWAS LAGLHSVPEF VSAAQTQTTT QSHGVACYAN NDFYVPSMPQ  240
MCHVNSGRVG NSVEEEVQSG LRNQRVDNSG LFQHNSAVLT QPNFCSLVDP YGLRHPTQSS  300
GFGFRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-88NAC family protein