PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59472.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 347aa MW: 38846.6 Da PI: 8.5528

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.3	5.1e-52	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++ GAY59472.1 14 LPPGFRFYPTDEELLVQYLCRKVAGQHFSL-QIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT-EGRK 110 79*************************9.89***********7777799********************************9999.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg+kt+W+mheyrl GAY59472.1 111 VGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGVPETDPLS QLNLPPGFRF YPTDEELLVQ YLCRKVAGQH FSLQIIGEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLF EPSRKNGSSK LDDWVLCRIY KKHSGSQKPV SATSVSSSKE 180 HSNGSCSSSS SHLDDVLESL PEIDDRFFAL PRMNSLKTLQ QEDNKVNNLQ HLGSGNFDWA 240 SLAGLHSVPE FVSAAQTQTT TQSHGVACYA NNDFYVPSMP QMCHVNSGRV GNSVEEEVQS 300 GLRNQRVDNS GLFQHNSAVL TQPNFCSLVD PYGLRHPTQS SGFGFRH

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGVPETDPLS QLNLPPGFRF YPTDEELLVQ YLCRKVAGQH FSLQIIGEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLF EPSRKNGSSK LDDWVLCRIY KKHSGSQKPV SATSVSSSKE  180
HSNGSCSSSS SHLDDVLESL PEIDDRFFAL PRMNSLKTLQ QEDNKVNNLQ HLGSGNFDWA  240
SLAGLHSVPE FVSAAQTQTT TQSHGVACYA NNDFYVPSMP QMCHVNSGRV GNSVEEEVQS  300
GLRNQRVDNS GLFQHNSAVL TQPNFCSLVD PYGLRHPTQS SGFGFRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-131	NAC family protein