PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59287.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 335aa    MW: 39548.6 Da    PI: 4.3062
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.12e-12108192286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt++e  +L+e+  e+  +l+r++l+  +W evs+k+ ++ ++e++  qC++ ++ l+++ykk+k   ++   ++s ++++f++++
  GAY59287.1 108 WTEHEAFVLLEIWGERFLQLGRKSLRSEDWVEVSEKVtEALKVEKTEAQCRQMMDVLKRKYKKEKVKVEQMGVNDS-KWVFFKKMD 192
                 *************************************77899***********************88888755555.8*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MDDTEDDARY PPKPYSLNRQ KLPSYSRPIK NRYQYEEEDE DDEIEDRIEE ENEEEEGGYH  60
VQFNDQSAYR HNFNESENFE RYPKRQRLRS SGSGYRLAPR SVKLSYDWTE HEAFVLLEIW  120
GERFLQLGRK SLRSEDWVEV SEKVTEALKV EKTEAQCRQM MDVLKRKYKK EKVKVEQMGV  180
NDSKWVFFKK MDMLMDMRKE SGGLACGIDS GEYVFMDTNV YLDRSNGFDE MRDSPSESEV  240
EEEEDDSNEG SLASLKMLAD SVNKFGDIYE KIENSKREQM MELEKMRMDF QKELELQKKQ  300
ILERAQLEIE KIREGDDDGD TDDGGDGDSM GNFSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.14e-93Trihelix family protein