PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59276.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 382aa MW: 42297.2 Da PI: 8.6204

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.8	2.5e-54	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v+s+ +++ GAY59276.1 16 LPPGFRFHPTDEELVVHYLKKKASSAPLPV-SIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSgSNQ 113 79**************************.89***********988899************************************97778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl GAY59276.1 114 KVGVKKALVFYGGKPPKGIKTNWIMHEYRL 143 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MESADSSTGG SPQPNLPPGF RFHPTDEELV VHYLKKKASS APLPVSIIAE VDLYKFDPWE 60 LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVMSSG SNQKVGVKKA 120 LVFYGGKPPK GIKTNWIMHE YRLTDNKVSN KPPGCDLGNK KNSLRLDDWV LCRIYKKNNL 180 HRPLMDHDKD DSMDDMLGVH IPPSLMISSQ QQNTNLKLHM PTRGANLNSF GALLVNEPNF 240 FEGLTSHDGI NNNSSNNNNG SISSHHHHQF AASSSSKLQV QAMDSLKRTL PSSSWTDHED 300 VPSGGALVNK RFHGENNVND DQSIEGRTDH HGNGSSSIAT LLSQLPQTPP PPSIHQQAIL 360 GSLGDGIFRQ PYHQLPGMNW YS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MESADSSTGG SPQPNLPPGF RFHPTDEELV VHYLKKKASS APLPVSIIAE VDLYKFDPWE  60
LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVMSSG SNQKVGVKKA  120
LVFYGGKPPK GIKTNWIMHE YRLTDNKVSN KPPGCDLGNK KNSLRLDDWV LCRIYKKNNL  180
HRPLMDHDKD DSMDDMLGVH IPPSLMISSQ QQNTNLKLHM PTRGANLNSF GALLVNEPNF  240
FEGLTSHDGI NNNSSNNNNG SISSHHHHQF AASSSSKLQV QAMDSLKRTL PSSSWTDHED  300
VPSGGALVNK RFHGENNVND DQSIEGRTDH HGNGSSSIAT LLSQLPQTPP PPSIHQQAIL  360
GSLGDGIFRQ PYHQLPGMNW YS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	284	289	DSLKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-114	NAC family protein