PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY59214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 487aa MW: 53669.1 Da PI: 5.2326 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.9 | 1.4e-11 | 307 | 349 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L GAY59214.1 307 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 349 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence |
MILEPNGAVW MEGEEEQPLS VSWTTAAAAT ATTTARATTE PKEDEMHVNA VSLSGFKSIL 60 DTDWFLNSTL NNPPQDFTNT TGLLETHQEL RAFNAFQETN LFFQPIESHP FTLNPTHSLL 120 PPNNNDNNSN SHLPFVSGFD LGGEAAGFIQ PGSGFMGLTT TQICATNDSD FHGFGSSYSN 180 CFDNLEGLFF NSNSKAKVCS QSQPTLFEKR AALRQSSGKL ESLEILGGNL LLENIKCRKN 240 EEASVDISSL NYESDEYNNN NNNNNASNDN NVNGKVDESV KNWNAGGSAT VGDNKGKRKG 300 LPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG DAIDYLKELL QRINDLHNEL 360 ESTPTGSLMQ PSTSIQPMTP TPPTLPCRVK EEISRSPTGE AARVEVRIRE GRAVNIHMFC 420 ARRPGLLLST MRALDSLGLD IQQAVISCFN GFALDVFRAE QCREGQDVLP KQIKSVLLDT 480 AGFHDVM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 297 | 315 | KRKGLPAKNLMAERRRRKK |
2 | 309 | 316 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 1e-109 | bHLH family protein |