PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59057.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 490aa MW: 54884.1 Da PI: 4.4156

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.5	1.2e-34	130	221	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye++ed+e++ ++sws n nsf+v+++++f++++LpkyFkh+nf+SF+RQLn+YgFkk+++++ weF++++F+ gkk+ll++ik GAY59057.1 130 FLRKIYEMVEDPETDPVVSWSLNRNSFIVWESHDFSENLLPKYFKHKNFSSFIRQLNTYGFKKIHSNR---------WEFANEKFRGGKKHLLKNIK 217 9******************999************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ GAY59057.1 218 RRSR 221 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MVIPTAVAGG AGGTFCSVCS SNLFPKPKSC QDVAMETIEE TVETENKIPL ITVKEDEEEE 60 KEASTYENSN GGGPSSSSSS MPTLPRIKEE EEEEEEEEEE EEGAFDDELV GGGSLPKPME 120 GLNEVGPPPF LRKIYEMVED PETDPVVSWS LNRNSFIVWE SHDFSENLLP KYFKHKNFSS 180 FIRQLNTYGF KKIHSNRWEF ANEKFRGGKK HLLKNIKRRS RFNKAQDGTV TLACVDSAKF 240 GVEMELETLR NDQKTLRLEM LKLRQQQDES LCQMSAVAER IRCAECKQQQ MLNFFAKIAK 300 YPNFVQQLVH KRKQQRELHG DEFKLSKKPR LTATQLESQS VPESVDSSEN VNCRNQAREQ 360 LATMQSELTD MLPADSTNID TTDTPPAFQA LMDDDGLCRS PIQDLKGNVM CTCGNGTTIT 420 AQDSSSVYNT FLGNVLGDSS ITENGTDDDQ VAVSDSQLFH ELEDLIGKSH SWGGYVNELA 480 EQVDCDGSIL

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MVIPTAVAGG AGGTFCSVCS SNLFPKPKSC QDVAMETIEE TVETENKIPL ITVKEDEEEE  60
KEASTYENSN GGGPSSSSSS MPTLPRIKEE EEEEEEEEEE EEGAFDDELV GGGSLPKPME  120
GLNEVGPPPF LRKIYEMVED PETDPVVSWS LNRNSFIVWE SHDFSENLLP KYFKHKNFSS  180
FIRQLNTYGF KKIHSNRWEF ANEKFRGGKK HLLKNIKRRS RFNKAQDGTV TLACVDSAKF  240
GVEMELETLR NDQKTLRLEM LKLRQQQDES LCQMSAVAER IRCAECKQQQ MLNFFAKIAK  300
YPNFVQQLVH KRKQQRELHG DEFKLSKKPR LTATQLESQS VPESVDSSEN VNCRNQAREQ  360
LATMQSELTD MLPADSTNID TTDTPPAFQA LMDDDGLCRS PIQDLKGNVM CTCGNGTTIT  420
AQDSSSVYNT FLGNVLGDSS ITENGTDDDQ VAVSDSQLFH ELEDLIGKSH SWGGYVNELA  480
EQVDCDGSIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	219	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	3e-82	HSF family protein