PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY59044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 812aa MW: 87631.5 Da PI: 6.4722 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.5 | 3.8e-16 | 469 | 515 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq GAY59044.1 469 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 515 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 812 aa Download sequence |
MPLFELYQMT KEKLDSAKQK NPSSSTDLSF EPENDLVELV WENGQILKQG QSSRTKKSPT 60 SNSLPSYCLP SHTPKNRDKD LGKTGKFGTV DAMLNGIQMS DPSGEMGLNQ DDDMVPWLNY 120 AVDESLQQDY CSDFLHELSG VTGNELSNQN NFASFDKRSS SNQFDREFNS VFGNHGARLE 180 HGNVSKVSSV GGGEATRPRS STNPLYTSSS QQCQTSFPNL RSVVSDSTSN GIKNSTDNGI 240 FQGSNPTATG NLSGLKLHKQ DQRLSTNNSG VMNFSHFARP VALVRANLQN IGSMPGARLS 300 RIERMGSKDK SSVASRSPVE SPLIDSSGCL RKESSCQPAA VTSKVDVKPQ EAKSSEQPVS 360 EPPEAACRED ALNNDKKPSQ VHAESATKGV VESEKTVEPV VAASSVCSGN SVERASDDLP 420 HNVKRKHCDL DDSECPSEEQ DVEEESVGVK KQVPGRVGTG SKRSRAAEVH NLSERRRRDR 480 INEKMRALQE LIPNCNKVDK ASMLDEAIEY LKTLQLQVQI MSMGAGFYMP PMMYPSGMQH 540 MHAAHMAHFP PIGIGMGMGI GYGMGMPDIN GGSSCYPMVQ VPAMHGAHFP GTSFSGSSAL 600 QGMAGSNFQL LGLPAQGHPM SMPHAPLNPL SGGPIMKSAM GLNPTGMVGS MDNTDAAKGS 660 TSKDLVQNVN SQVKQNTGAK GPVDQASGQC EATNESSAEP AAVQDNCQAS EVNGPVTYNS 720 SRKNENESSN PACEYTLSSN LNSNNRTERH EFAQNLNYAR KVEFLYTNVC IGELLIILQP 780 AFSLPYPARR SLKDSAVSNH EQGSMPGHVY KS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 474 | 479 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 3e-54 | bHLH family protein |