PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY58923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 121aa MW: 13849.7 Da PI: 8.6533 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 35.4 | 2.8e-11 | 19 | 87 | 2 | 70 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e l L + +e + ++ + ++W+ +s+ + + + r+++qC+ kw++l +ykki +++ GAY58923.1 19 WSSKEALILGNEIAAVEADCLKALSSYQKWKIISETCTALDVPRTANQCRRKWDSLIDEYKKIIVRSRT 87 777777777777778888888888999***********************************9776665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MEGGSSRTRH TRSQVGPDWS SKEALILGNE IAAVEADCLK ALSSYQKWKI ISETCTALDV 60 PRTANQCRRK WDSLIDEYKK IIVRSRTFPK SQTQAHTDCF PPNFDRELFK AIHDFVMSKD 120 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 4e-37 | Trihelix family protein |