PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58912.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 635aa MW: 69312.5 Da PI: 7.7404

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.9	2.1e-33	251	308	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k GAY58912.1 251 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSL-DGQITEIVYKGSHNHPK 308 8**************************************.*************85 PP
2	WRKY	36.5	9.6e-12	429	451	1	23
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYGqK+vkg+++pr GAY58912.1 429 LDDGYRWRKYGQKVVKGNPNPRL 451 59*******************95 PP
3	WRKY	57.3	3.1e-18	476	515	20	59
S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 p+sYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ GAY58912.1 476 IPKSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 515 69*************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MASSSGNLDT LTNSHHHHPT NNFTFSTHPF MNPTSFTDLL TSSAPADHAQ LHSNNSNTTT 60 TTTTRGLSDR IAERTGSGVP KFKSIQPPSL PISPPSLFSP SSYFSIPAGL SPAELLDSPV 120 LLNTSNDGIR TPGCDTWMVL PSPTTGAFQT FNWKSNIGSN DQQRVKQENK NQSDFSFPTQ 180 TRPNTTSSIV CNAQQNQPWN YQESTKQDVK LAESFSTTLQ SNNQSNSGFQ SDFGNYQHQQ 240 SQPIRESKKS DDGYNWRKYG QKQVKGSENP RSYYKCTFPS CPTKKKVERS LDGQITEIVY 300 KGSHNHPKPQ STRRSSSSSV NSNAIQASTQ HSNEIQDQSY ATHGSGQMDS AATPENSSIS 360 VGDDDVDQGS QKSKSGGGGA GGGDDFDEDE PEAKRWKIEG ESEGISAPGS RTVREPRVVV 420 QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR LVLKVPNCKA SALNLLAANG MHIAFIPKSY 480 YKCTHPGCPV RKHVERASHD LRAVITTYEG KHNHDVPAAR GSGSRALPDN SSNNNHNSNS 540 NSNNNGTLPV RASAVAHHPN NNSILNPVHN LRVSSSEGQA PYTLEMLQGS GSFGFPGYGN 600 ALGSYMNEGQ QQDNVLSRAK EEPRDHDTFF ESLLF

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MASSSGNLDT LTNSHHHHPT NNFTFSTHPF MNPTSFTDLL TSSAPADHAQ LHSNNSNTTT  60
TTTTRGLSDR IAERTGSGVP KFKSIQPPSL PISPPSLFSP SSYFSIPAGL SPAELLDSPV  120
LLNTSNDGIR TPGCDTWMVL PSPTTGAFQT FNWKSNIGSN DQQRVKQENK NQSDFSFPTQ  180
TRPNTTSSIV CNAQQNQPWN YQESTKQDVK LAESFSTTLQ SNNQSNSGFQ SDFGNYQHQQ  240
SQPIRESKKS DDGYNWRKYG QKQVKGSENP RSYYKCTFPS CPTKKKVERS LDGQITEIVY  300
KGSHNHPKPQ STRRSSSSSV NSNAIQASTQ HSNEIQDQSY ATHGSGQMDS AATPENSSIS  360
VGDDDVDQGS QKSKSGGGGA GGGDDFDEDE PEAKRWKIEG ESEGISAPGS RTVREPRVVV  420
QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR LVLKVPNCKA SALNLLAANG MHIAFIPKSY  480
YKCTHPGCPV RKHVERASHD LRAVITTYEG KHNHDVPAAR GSGSRALPDN SSNNNHNSNS  540
NSNNNGTLPV RASAVAHHPN NNSILNPVHN LRVSSSEGQA PYTLEMLQGS GSFGFPGYGN  600
ALGSYMNEGQ QQDNVLSRAK EEPRDHDTFF ESLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-105	WRKY family protein