PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58728.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 313aa    MW: 34920.4 Da    PI: 4.7326
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.4e-10130172855
                 HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  Er+RR ++++++  Lr l+P+ +      K++Ka+i   Av Y+++Lq
  GAY58728.1 130 SERKRRGKMKEKLYGLRALVPNiS------KMDKASIIGDAVSYLQELQ 172
                 6*********************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDEFGNPLTL HAFIDDPNFD QFIDLIRGEN EDPLASFDCD LINGCFADTQ FIGSAQDDVF  60
GHFNGTAAGT MVSDDLTFVL NSSFPDLDGD MKGEHREEEN NGDDSSGATR TATTASTRNK  120
KADRSRTLVS ERKRRGKMKE KLYGLRALVP NISKMDKASI IGDAVSYLQE LQMQVRKLKA  180
EIASLEYSMA GSEKNQEPIQ KPKKTQVLSG NLQPICKKIM QIDVFQVEER RFYLRLVSSG  240
GQGVAVSLYK ALESLTSFDV QNFNFATEPE RLVLTFNLNV KDCEQNMNLP NLRLWVTGAL  300
LNQGFDVVTP FST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.17e-92bHLH family protein