PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58724.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 309aa    MW: 34271.8 Da    PI: 6.3072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.5e-10125168755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ErrRR ++++++  Lr l+P+      +K++Ka+i+  Av Y+++Lq
  GAY58724.1 125 ISERRRRGKMKEKLYALRALVPNI-----TKMDKASIVGDAVLYVQDLQ 168
                 67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDASAYPMMQ NKDFELHDFI DDPNIDQFID LIQGENEILE PSFGCTFVSE CIVDNQIGST  60
GEDMFGTLAS DLAFVHNSSL SGLNGDANEG VQEEDNDGDD SSGRARTTTT KCTKKPKVDR  120
SRTLISERRR RGKMKEKLYA LRALVPNITK MDKASIVGDA VLYVQDLQMK AKKLKTEIAD  180
LEASLTGAER QDQESTGNTK KTRVRSKKNP TCKKIMQMGV FQVEKRGFYV RLVCSKGEGV  240
AVSLYQALES LTSFSIQNSN LTTVSEKFVL TFTSSVRGSD QNMHLTNMKL WVTKALVNQG  300
FEVLTPSSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-83bHLH family protein