PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58217.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 407aa MW: 44872.3 Da PI: 8.133

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.7	1.1e-32	264	319	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ GAY58217.1 264 KQRRCWSPELHRRFVSALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 319 79****************************************************97 PP
2	Myb_DNA-binding	44.5	3.5e-14	266	317	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m+ g+t ++ks++qky+ GAY58217.1 266 RRCWSPELHRRFVSALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 317 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGSVPPELSL DFRPTNFVPK TITDFLREVS LIGNVSEKLS KLDSFLKGLE DELRKIDAFK 60 RELPLCMLLL NDAILVLKEE SMQCARASKK VQPVLEEFIP LKNNNSEDDD EDARPIKKEK 120 DSSKDNKKNW MSSVQLWNTD DNHPTNDPIF DSKQNLNLKI KRNEEENPFQ ACKSRAGAVA 180 GAGAGATAFL PFKTCPVFPR KDDKEELPVH GLSLVTPGMK NPREDTGSTG SRTSCSKSVS 240 SSAPNAQSNL RTGPQPPQQQ TNRKQRRCWS PELHRRFVSA LQQLGGSQVA TPKQIRELMQ 300 VDGLTNDEVK SHLQKYRLHT RRTSPAVPAA PANQSTVVLG SLWMSQDQYG DSSKASSSQS 360 GSPQGPLQLT GNTGGTSTTG GDSMEDDEDA KSEGYSWKSH IHKPGKE

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGSVPPELSL DFRPTNFVPK TITDFLREVS LIGNVSEKLS KLDSFLKGLE DELRKIDAFK  60
RELPLCMLLL NDAILVLKEE SMQCARASKK VQPVLEEFIP LKNNNSEDDD EDARPIKKEK  120
DSSKDNKKNW MSSVQLWNTD DNHPTNDPIF DSKQNLNLKI KRNEEENPFQ ACKSRAGAVA  180
GAGAGATAFL PFKTCPVFPR KDDKEELPVH GLSLVTPGMK NPREDTGSTG SRTSCSKSVS  240
SSAPNAQSNL RTGPQPPQQQ TNRKQRRCWS PELHRRFVSA LQQLGGSQVA TPKQIRELMQ  300
VDGLTNDEVK SHLQKYRLHT RRTSPAVPAA PANQSTVVLG SLWMSQDQYG DSSKASSSQS  360
GSPQGPLQLT GNTGGTSTTG GDSMEDDEDA KSEGYSWKSH IHKPGKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	5e-56	G2-like family protein