PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58175.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 496aa MW: 54691.1 Da PI: 6.4681

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.4	6.8e-33	265	319	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++L G+ekAtPk++l+lm+ +gLt++hvkSHLQkYRl GAY58175.1 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNAEGLTIYHVKSHLQKYRL 319 79****************************************************8 PP
2	Myb_DNA-binding	57.7	2.7e-18	267	318	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++l g+ t+k++ + m+ +g+t +++ks++qky+ GAY58175.1 267 RMRWTPELHECFVEAVNKLDGPekaTPKAVLKLMNaEGLTIYHVKSHLQKYR 318 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MNHHSIISVT KNESNKGVSQ SCCSALSPIH NFQTECQSLS TGEYPFPHPS PFIRKESLSS 60 PNRMQASTVV PKENGLISTS DSPISPGSHF QHSKGGFSRS SVFCTSLYLS SSASSETHRQ 120 IGNFPFLPHP RTFNQSVSAV DSTKSSLLFS EDMGNAYQEE HSESLMKGFL NFPEDASDGS 180 FPGVTCMGER LGLNEHLELQ FLSDELDIDI TDHGENPRLD EIYDAPKSSL KPPMGLSCKE 240 NYVSSAPPVD ALSSHTSPAS ATAHKPRMRW TPELHECFVE AVNKLDGPEK ATPKAVLKLM 300 NAEGLTIYHV KSHLQKYRLA KYMPEKKEEK KTCSSEEKKA TSSIESDGRK KGSIQFTEAL 360 RMQIEVQKQL HEQLEVQRAL QLRIEEHARY LEKIVAEQQK DGSATILPQA QSLSTITNGS 420 KDSEQQPSSP SFTVSAILSP EQPAESKTES SSTSLLSKHK ATDSRESKPD ACLKRIRLEN 480 KPEITSGEAV VENPVQ

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MNHHSIISVT KNESNKGVSQ SCCSALSPIH NFQTECQSLS TGEYPFPHPS PFIRKESLSS  60
PNRMQASTVV PKENGLISTS DSPISPGSHF QHSKGGFSRS SVFCTSLYLS SSASSETHRQ  120
IGNFPFLPHP RTFNQSVSAV DSTKSSLLFS EDMGNAYQEE HSESLMKGFL NFPEDASDGS  180
FPGVTCMGER LGLNEHLELQ FLSDELDIDI TDHGENPRLD EIYDAPKSSL KPPMGLSCKE  240
NYVSSAPPVD ALSSHTSPAS ATAHKPRMRW TPELHECFVE AVNKLDGPEK ATPKAVLKLM  300
NAEGLTIYHV KSHLQKYRLA KYMPEKKEEK KTCSSEEKKA TSSIESDGRK KGSIQFTEAL  360
RMQIEVQKQL HEQLEVQRAL QLRIEEHARY LEKIVAEQQK DGSATILPQA QSLSTITNGS  420
KDSEQQPSSP SFTVSAILSP EQPAESKTES SSTSLLSKHK ATDSRESKPD ACLKRIRLEN  480
KPEITSGEAV VENPVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-113	G2-like family protein