PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 183aa MW: 20892.4 Da PI: 9.0948 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105 | 4.1e-33 | 104 | 162 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg Hnh+ GAY57991.1 104 LDDGYRWRKYGQKAVKDNKFPRSYYRCTHEGCNVKKQVQRLTKDEGIVVTTYEGMHNHR 162 59********************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MENCQMFFPC SSTGKSVYPV MTTTDYIANS SDHVFSHGDQ SSSSGGFLGL KQNSGPNTDI 60 VKNDSINGAF HGSESEEKSS KMKGEKKIKK PRFAFQTRSQ VDILDDGYRW RKYGQKAVKD 120 NKFPRSYYRC THEGCNVKKQ VQRLTKDEGI VVTTYEGMHN HRIEKPTDNF EHILNQLQIY 180 TPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 3e-54 | WRKY family protein |