PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57931.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 460aa MW: 51612.4 Da PI: 5.7645

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.4	2.9e-14	263	309	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+++N +f L++l+P++ +K++ a+++ A+eYIk+L GAY57931.1 263 TKHFATERQRREQLNGKFKALKDLVPNP-----TKNDRASVVGDAIEYIKEL 309 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MYEETGCFDP NSMAEGGDDG ISQSVKHHKE DDAAVSAIEL ELQKHLAFNV EDTHTQSISI 60 NSNTHSIHDP ANQNHQILPP YEHSHSNWDS GVVSADHMGG FDQNENDQSQ QSFINTDISS 120 SFAQSQTPPL LNLLQFPRCT TSSMLPPNSS ISFTNPDHHF PVPPPTSTDV LYDPLFHLNL 180 PPQPQPPLFR ELFQSIPHGY SFPASASRAA ANSLFGEIGD ERDATGAFYE DGDVGVHLDN 240 RVLEFSRDLG CIGRRRETAG KPTKHFATER QRREQLNGKF KALKDLVPNP TKNDRASVVG 300 DAIEYIKELL RTVNELKLLV EKKRCVRERR KRHRTEGDDE GMKPLVDPAD QSYNSSLRSS 360 WLQRKSKDTE VDVRIIDDEV TIKLVQRKKI DCLLFVSRVL DELQLDLHHV AGGHIGDYYS 420 FLFNTKIYEG SSVYAGSIAN KLIEVMDKQY AAVPPTSCAY

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MYEETGCFDP NSMAEGGDDG ISQSVKHHKE DDAAVSAIEL ELQKHLAFNV EDTHTQSISI  60
NSNTHSIHDP ANQNHQILPP YEHSHSNWDS GVVSADHMGG FDQNENDQSQ QSFINTDISS  120
SFAQSQTPPL LNLLQFPRCT TSSMLPPNSS ISFTNPDHHF PVPPPTSTDV LYDPLFHLNL  180
PPQPQPPLFR ELFQSIPHGY SFPASASRAA ANSLFGEIGD ERDATGAFYE DGDVGVHLDN  240
RVLEFSRDLG CIGRRRETAG KPTKHFATER QRREQLNGKF KALKDLVPNP TKNDRASVVG  300
DAIEYIKELL RTVNELKLLV EKKRCVRERR KRHRTEGDDE GMKPLVDPAD QSYNSSLRSS  360
WLQRKSKDTE VDVRIIDDEV TIKLVQRKKI DCLLFVSRVL DELQLDLHHV AGGHIGDYYS  420
FLFNTKIYEG SSVYAGSIAN KLIEVMDKQY AAVPPTSCAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	2e-75	bHLH family protein