PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57852.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 241aa    MW: 27084.6 Da    PI: 7.5177
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.42.5e-32167225159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  GAY57852.1 167 LDDGYKWRKYGQKIVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS 225
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEGEKSSAGA GVGIPNYEVQ ASFTTAEAEA AAAAAAAQGM GSFVHDFDEN HEHQVLSFMG  60
APPSNSHSHY SSPISLHPLI INSRHSTENS ALGFTHTSNH DHHHQVGPLN PRAVNNENCT  120
SNHASDEGHN SWWRSSSSSE KINKVKARRK LREPRFCFQT RSDVDVLDDG YKWRKYGQKI  180
VKNSLHPRSY YRCTHNNCRV KKRVERLSED CRMVITTYEG RHNHSPCDDS NSSDHECFAH  240
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-65WRKY family protein