PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57778.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family DBB
Protein Properties Length: 202aa    MW: 22744.5 Da    PI: 8.3581
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.13.3e-07433534
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                 C+ +e   ++lfC  ++  lC++C ++ H
  GAY57778.1  4 LCDVCEATAATLFCPADEAALCASCDVKVH 33
                7******99******************999 PP
2zf-B_box24.55.8e-086598538
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkgHt 38
                kC++++++++ lfCe+ ++++C +C +  H gH 
  GAY57778.1 65 KCDLCDREKAFLFCEKGGMCICLTCDMVFHIGHP 98
                8*****************************8896 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MQILCDVCEA TAATLFCPAD EAALCASCDV KVHELAPFYD YKEHMNNKLA SSHVRHDLPP  60
SSFGKCDLCD REKAFLFCEK GGMCICLTCD MVFHIGHPRF LVMRQKIQFP VEDPIWGKPI  120
SRPLNQAEIK KEQNDPLEMT IGGDQQNHKV FPTAVADVRA TSKAKRGNKM IDLNRKPRNP  180
KAAAPKYKVR ISLLSTRKEV DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21320.12e-33DBB family protein