PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57629.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HSF | ||||||||
Protein Properties | Length: 467aa MW: 52671.1 Da PI: 4.6353 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111.7 | 5.1e-35 | 49 | 140 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye++ed +++ ++sws++ nsf+v+d+++f++++LpkyFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik GAY57629.1 49 FLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKTIK 136 9********************999*****************************************999.........******************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ GAY57629.1 137 RRRH 140 *975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MEGVRVKEEE TVTYAATTAT AASASSSSSS SNFMPQPLEG LHDAGPPPFL TKTYEMVEDL 60 STDAIVSWSR TRNSFIVWDS HQFSTTLLPK YFKHSNFSSF IRQLNTYGFR KVDPDRWEFA 120 NEGFLGGQKH LLKTIKRRRH VSQSMQQRGG EACLEVGQYG LDGELERLKR DRNVLMAEIV 180 RLRQHQQQSR DQLSAMEDRL LSTEKKQQQM MTFLAKALKN PSFFQQLAQS NAHRRELGGV 240 QTGRKRRLTA TPSMENLQET ISVAPVGLDC GPVVDYTVQD QNELTSMETE IETFLSSPVD 300 NESSSDIDNP NAGSVPAPSG GNFSSVNETI WEDFMADDLI AGDPEEVVVK DQSEAEVELE 360 DLVATPTDWG EELQDLVDQM GYLSWKSRSC KEANDICSCS TADSKRKEEF QPVIDFRDML 420 KVQLPNLLAL WTFAVSCPLY LFLCLYQLSD YRYVNTKGLV QTNLILL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 138 | LKTIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-127 | HSF family protein |